Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV27A0A0K0K1C4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV27A0A0K0K1C4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
TRBV27A0A0K0K1C4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC14.57□□□□□ -0.08
TRBV27A0A0K0K1C4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV27A0A0K0K1C4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRBV27A0A0K0K1C4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TRBV27A0A0K0K1C4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
TRBV27A0A0K0K1C4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRBV27A0A0K0K1C4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV27A0A0K0K1C4 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV27A0A0K0K1C4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV27A0A0K0K1C4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV27A0A0K0K1C4 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC14.57□□□□□ -0.08
TRBV27A0A0K0K1C4 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRBV27A0A0K0K1C4 AC133561.4-201ENST00000566112 224 ntBASIC14.57□□□□□ -0.08
TRBV27A0A0K0K1C4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC14.57□□□□□ -0.08
TRBV27A0A0K0K1C4 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC14.57□□□□□ -0.08
TRBV27A0A0K0K1C4 AC092720.2-201ENST00000602388 1665 ntBASIC14.57□□□□□ -0.08
TRBV27A0A0K0K1C4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV27A0A0K0K1C4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV27A0A0K0K1C4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV27A0A0K0K1C4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC14.57□□□□□ -0.08
TRBV27A0A0K0K1C4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
TRBV27A0A0K0K1C4 TCF3P1-201ENST00000423021 1937 ntBASIC14.56□□□□□ -0.08
TRBV27A0A0K0K1C4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV27A0A0K0K1C4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV27A0A0K0K1C4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV27A0A0K0K1C4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC14.56□□□□□ -0.08
TRBV27A0A0K0K1C4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV27A0A0K0K1C4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV27A0A0K0K1C4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TRBV27A0A0K0K1C4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV27A0A0K0K1C4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC14.56□□□□□ -0.08
TRBV27A0A0K0K1C4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV27A0A0K0K1C4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV27A0A0K0K1C4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC14.56□□□□□ -0.08
TRBV27A0A0K0K1C4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV27A0A0K0K1C4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC14.56□□□□□ -0.08
TRBV27A0A0K0K1C4 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
TRBV27A0A0K0K1C4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC14.56□□□□□ -0.08
TRBV27A0A0K0K1C4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV27A0A0K0K1C4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TRBV27A0A0K0K1C4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV27A0A0K0K1C4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV27A0A0K0K1C4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV27A0A0K0K1C4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV27A0A0K0K1C4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV27A0A0K0K1C4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TRBV27A0A0K0K1C4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TRBV27A0A0K0K1C4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TRBV27A0A0K0K1C4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TRBV27A0A0K0K1C4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC14.55□□□□□ -0.08
TRBV27A0A0K0K1C4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV27A0A0K0K1C4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC14.55□□□□□ -0.08
TRBV27A0A0K0K1C4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV27A0A0K0K1C4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC14.55□□□□□ -0.08
TRBV27A0A0K0K1C4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC14.55□□□□□ -0.08
TRBV27A0A0K0K1C4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TRBV27A0A0K0K1C4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TRBV27A0A0K0K1C4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC14.55□□□□□ -0.08
TRBV27A0A0K0K1C4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV27A0A0K0K1C4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV27A0A0K0K1C4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV27A0A0K0K1C4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC14.55□□□□□ -0.08
TRBV27A0A0K0K1C4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV27A0A0K0K1C4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC14.55□□□□□ -0.08
TRBV27A0A0K0K1C4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV27A0A0K0K1C4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
TRBV27A0A0K0K1C4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV27A0A0K0K1C4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV27A0A0K0K1C4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV27A0A0K0K1C4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
TRBV27A0A0K0K1C4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV27A0A0K0K1C4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRBV27A0A0K0K1C4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV27A0A0K0K1C4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV27A0A0K0K1C4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
TRBV27A0A0K0K1C4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC14.54□□□□□ -0.08
TRBV27A0A0K0K1C4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRBV27A0A0K0K1C4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV27A0A0K0K1C4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TRBV27A0A0K0K1C4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC14.54□□□□□ -0.08
TRBV27A0A0K0K1C4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC14.54□□□□□ -0.08
TRBV27A0A0K0K1C4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV27A0A0K0K1C4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC14.54□□□□□ -0.08
TRBV27A0A0K0K1C4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC14.54□□□□□ -0.08
TRBV27A0A0K0K1C4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC14.54□□□□□ -0.08
TRBV27A0A0K0K1C4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV27A0A0K0K1C4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
TRBV27A0A0K0K1C4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
TRBV27A0A0K0K1C4 BX323043.1-201ENST00000641006 1765 ntBASIC14.54□□□□□ -0.08
TRBV27A0A0K0K1C4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV27A0A0K0K1C4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRBV27A0A0K0K1C4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV27A0A0K0K1C4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV27A0A0K0K1C4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV27A0A0K0K1C4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV27A0A0K0K1C4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV27A0A0K0K1C4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms