Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 SPTAN1-203ENST00000372739 7868 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SLC1A1P43005 AC009403.1-202ENST00000460022 1356 ntTSL 2 BASIC9.98□□□□□ -0.81
SLC1A1P43005 CCDC65-202ENST00000320516 1775 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SLC1A1P43005 PLS3-AS1-202ENST00000607680 1763 ntTSL 2 BASIC9.98□□□□□ -0.81
SLC1A1P43005 TMEM35A-201ENST00000372930 2195 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SLC1A1P43005 UBA1-203ENST00000377351 3466 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SLC1A1P43005 AC132825.3-201ENST00000562182 4710 ntBASIC9.98□□□□□ -0.81
SLC1A1P43005 AC012354.1-201ENST00000425325 2685 ntTSL 3 BASIC9.98□□□□□ -0.81
SLC1A1P43005 NIP7-202ENST00000254941 1887 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
SLC1A1P43005 GTF3C2-202ENST00000359541 3992 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SLC1A1P43005 AL139020.1-203ENST00000556386 2738 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
SLC1A1P43005 ROBO1-204ENST00000467549 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
SLC1A1P43005 AC117945.2-201ENST00000642109 1521 ntBASIC9.97□□□□□ -0.81
SLC1A1P43005 PLCH1-204ENST00000460012 6413 ntAPPRIS P3 TSL 5 BASIC9.97□□□□□ -0.81
SLC1A1P43005 SH3KBP1-203ENST00000379716 3819 ntTSL 2 BASIC9.97□□□□□ -0.81
SLC1A1P43005 DIAPH3-203ENST00000400319 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
SLC1A1P43005 CTH-203ENST00000411986 2044 ntTSL 2 BASIC9.97□□□□□ -0.81
SLC1A1P43005 SEC16B-204ENST00000464631 2948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
SLC1A1P43005 DNAJC24-202ENST00000465995 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SLC1A1P43005 LINC00838-201ENST00000562956 2936 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SLC1A1P43005 FAM13C-214ENST00000611933 3033 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
SLC1A1P43005 LINC02363-201ENST00000317596 2153 ntTSL 2 BASIC9.97□□□□□ -0.81
SLC1A1P43005 SERPINB2-205ENST00000457692 2155 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
SLC1A1P43005 DCTN4-203ENST00000447998 4208 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
SLC1A1P43005 CSF2RA-205ENST00000381524 2291 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
SLC1A1P43005 KCNMA1-AS1-206ENST00000600782 1755 ntTSL 5 BASIC9.97□□□□□ -0.81
SLC1A1P43005 ERG-204ENST00000398907 4809 ntTSL 5 BASIC9.97□□□□□ -0.81
SLC1A1P43005 SIRPG-201ENST00000216927 831 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SLC1A1P43005 SPINT3-201ENST00000217428 476 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SLC1A1P43005 GPRC5D-201ENST00000228887 1038 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
SLC1A1P43005 AL450998.1-201ENST00000321418 438 ntBASIC9.97□□□□□ -0.81
SLC1A1P43005 MYL4-201ENST00000354968 907 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
SLC1A1P43005 DCTN3-204ENST00000378913 951 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SLC1A1P43005 IGLV5-45-201ENST00000390296 397 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
SLC1A1P43005 GPRC5D-202ENST00000396333 903 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
SLC1A1P43005 AC068051.1-201ENST00000412896 442 ntTSL 4 BASIC9.97□□□□□ -0.81
SLC1A1P43005 AL445426.1-201ENST00000427290 547 ntTSL 3 BASIC9.97□□□□□ -0.81
SLC1A1P43005 PPP1R2P1-210ENST00000429032 618 ntBASIC9.97□□□□□ -0.81
SLC1A1P43005 AL359555.1-201ENST00000437016 806 ntTSL 2 BASIC9.97□□□□□ -0.81
SLC1A1P43005 AC068051.1-202ENST00000437883 543 ntTSL 4 BASIC9.97□□□□□ -0.81
SLC1A1P43005 COX17-206ENST00000497116 660 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
SLC1A1P43005 AC096588.1-201ENST00000504537 558 ntTSL 3 BASIC9.97□□□□□ -0.81
SLC1A1P43005 NUDT19P5-201ENST00000505620 569 ntBASIC9.97□□□□□ -0.81
SLC1A1P43005 AP002026.1-203ENST00000506160 524 ntTSL 4 BASIC9.97□□□□□ -0.81
SLC1A1P43005 AC245052.6-201ENST00000506567 219 ntBASIC9.97□□□□□ -0.81
SLC1A1P43005 LINC02217-203ENST00000508677 296 ntTSL 3 BASIC9.97□□□□□ -0.81
SLC1A1P43005 C5orf66-203ENST00000513931 474 ntTSL 3 BASIC9.97□□□□□ -0.81
SLC1A1P43005 SCARNA16-201ENST00000515981 187 ntBASIC9.97□□□□□ -0.81
SLC1A1P43005 SNRPCP17-201ENST00000520330 205 ntBASIC9.97□□□□□ -0.81
SLC1A1P43005 MBP-228ENST00000527041 582 ntTSL 5 BASIC9.97□□□□□ -0.81
SLC1A1P43005 LINC01405-204ENST00000553177 524 ntTSL 4 BASIC9.97□□□□□ -0.81
SLC1A1P43005 AC103739.2-201ENST00000559839 807 ntTSL 4 BASIC9.97□□□□□ -0.81
SLC1A1P43005 FOXC2-AS1-201ENST00000563280 319 ntTSL 3 BASIC9.97□□□□□ -0.81
SLC1A1P43005 CMTM3-209ENST00000565003 643 ntTSL 3 BASIC9.97□□□□□ -0.81
SLC1A1P43005 AC005670.1-201ENST00000572349 395 ntTSL 3 BASIC9.97□□□□□ -0.81
SLC1A1P43005 AC119868.1-201ENST00000579307 336 ntBASIC9.97□□□□□ -0.81
SLC1A1P43005 AC016590.1-202ENST00000586324 525 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SLC1A1P43005 DPP6-216ENST00000619756 1109 ntTSL 5 BASIC9.97□□□□□ -0.81
SLC1A1P43005 AL513327.1-204ENST00000630229 870 ntTSL 5 BASIC9.97□□□□□ -0.81
SLC1A1P43005 OR10J1-202ENST00000641630 1089 ntBASIC9.97□□□□□ -0.81
SLC1A1P43005 RPS20P22-202ENST00000488192 1318 ntBASIC9.97□□□□□ -0.81
SLC1A1P43005 CLEC4M-201ENST00000248228 1865 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
SLC1A1P43005 LRTOMT-222ENST00000615940 1895 ntTSL 5 BASIC9.97□□□□□ -0.81
SLC1A1P43005 CUX1-206ENST00000437600 3031 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SLC1A1P43005 MAP3K13-209ENST00000443863 3025 ntTSL 2 BASIC9.97□□□□□ -0.81
SLC1A1P43005 ANXA2-203ENST00000421017 1444 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SLC1A1P43005 ACAP2-215ENST00000618471 3207 ntTSL 5 BASIC9.97□□□□□ -0.81
SLC1A1P43005 PDLIM5-207ENST00000503974 2081 ntTSL 2 BASIC9.97□□□□□ -0.81
SLC1A1P43005 FCGR2C-211ENST00000543859 1507 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
SLC1A1P43005 ZNF610-203ENST00000403906 2191 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
SLC1A1P43005 NDUFS1-209ENST00000457011 2171 ntTSL 2 BASIC9.97□□□□□ -0.81
SLC1A1P43005 FAF1-201ENST00000371778 1643 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
SLC1A1P43005 SYNJ1-202ENST00000382491 6958 ntTSL 5 BASIC9.96□□□□□ -0.81
SLC1A1P43005 BDNF-201ENST00000314915 4340 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
SLC1A1P43005 ZFYVE1-201ENST00000318876 4362 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
SLC1A1P43005 DAZL-202ENST00000399444 3050 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
SLC1A1P43005 PRMT3-203ENST00000437750 1736 ntTSL 2 BASIC9.96□□□□□ -0.81
SLC1A1P43005 AC026356.2-201ENST00000614539 1796 ntBASIC9.96□□□□□ -0.81
SLC1A1P43005 DZANK1-204ENST00000358866 3310 ntAPPRIS P2 TSL 5 BASIC9.96□□□□□ -0.81
SLC1A1P43005 ATP6V0A1-202ENST00000343619 4128 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.81
SLC1A1P43005 Z95114.3-201ENST00000624395 1921 ntBASIC9.96□□□□□ -0.81
SLC1A1P43005 ATXN1-202ENST00000436367 10587 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
SLC1A1P43005 KIF13A-203ENST00000378814 6924 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
SLC1A1P43005 TRIM32-201ENST00000373983 3688 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
SLC1A1P43005 NR2F1-AS1-202ENST00000504474 2868 ntTSL 2 BASIC9.96□□□□□ -0.81
SLC1A1P43005 FABP7-201ENST00000356535 2086 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
SLC1A1P43005 KRTAP9-8-201ENST00000254072 960 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
SLC1A1P43005 SAT2-201ENST00000269298 946 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
SLC1A1P43005 SPACA5B-201ENST00000304270 595 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
SLC1A1P43005 ST3GAL3-216ENST00000372368 1290 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
SLC1A1P43005 SPACA5-202ENST00000376940 571 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
SLC1A1P43005 AC073091.1-201ENST00000398059 864 ntBASIC9.96□□□□□ -0.82
SLC1A1P43005 TPT1P4-201ENST00000403538 519 ntBASIC9.96□□□□□ -0.82
SLC1A1P43005 AC007179.2-205ENST00000412409 707 ntTSL 3 BASIC9.96□□□□□ -0.82
SLC1A1P43005 AC092810.1-201ENST00000429208 1224 ntBASIC9.96□□□□□ -0.82
SLC1A1P43005 UBA52-201ENST00000430157 572 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
SLC1A1P43005 BSN-AS1-201ENST00000442384 461 ntTSL 3 BASIC9.96□□□□□ -0.82
SLC1A1P43005 AP000561.1-201ENST00000444130 435 ntTSL 5 BASIC9.96□□□□□ -0.82
SLC1A1P43005 GFOD1-AS1-201ENST00000446001 332 ntTSL 2 BASIC9.96□□□□□ -0.82
SLC1A1P43005 NDUFB4-205ENST00000492739 309 ntTSL 2 BASIC9.96□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms