RNA–Protein interactions for RNA: ENST00000425325.2

AC012354.1-201, humanhuman

TSL 3 BASIC

Gene AC012354.1, Length 2,685 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012354.1-201ENST00000425325 NISCHQ9Y2I1 1504 aa18.82■□□□□ 0.6
AC012354.1-201ENST00000425325 CHIC1Q5VXU3 224 aa17.87■□□□□ 0.45
AC012354.1-201ENST00000425325 AEBP2Q6ZN18 517 aaPredicted RBP17.47■□□□□ 0.39
AC012354.1-201ENST00000425325 SHROOM4Q9ULL8 1493 aa16.55■□□□□ 0.24
AC012354.1-201ENST00000425325 SUPT5HO00267 1087 aaKnown RBP16.32■□□□□ 0.2
AC012354.1-201ENST00000425325 PHF23Q9BUL5 403 aaPredicted RBP16.26■□□□□ 0.19
AC012354.1-201ENST00000425325 CCDC180Q9P1Z9 1646 aa16■□□□□ 0.15
AC012354.1-201ENST00000425325 ZCCHC6Q5VYS8 1495 aaKnown RBP15.94■□□□□ 0.14
AC012354.1-201ENST00000425325 DCAF8L2P0C7V8 631 aa15.93■□□□□ 0.14
AC012354.1-201ENST00000425325 EHMT2Q96KQ7 1210 aa15.88■□□□□ 0.13
AC012354.1-201ENST00000425325 MYO15BQ96JP2 1530 aa15.86■□□□□ 0.13
AC012354.1-201ENST00000425325 HRCP23327 699 aa15.84■□□□□ 0.13
AC012354.1-201ENST00000425325 PCGF6Q9BYE7 350 aa15.69■□□□□ 0.1
AC012354.1-201ENST00000425325 PPARGC1BQ86YN6 1023 aaKnown RBP15.69■□□□□ 0.1
AC012354.1-201ENST00000425325 LOC105371045A0A1W2PR82 267 aa15.52■□□□□ 0.08
AC012354.1-201ENST00000425325 ABCC9O60706 1549 aa15.4■□□□□ 0.06
AC012354.1-201ENST00000425325 SLC24A1O60721 1099 aa15.34■□□□□ 0.05
AC012354.1-201ENST00000425325 PELP1Q8IZL8 1130 aaKnown RBP15.31■□□□□ 0.04
AC012354.1-201ENST00000425325 DCAF1Q9Y4B6 1507 aa15.29■□□□□ 0.04
AC012354.1-201ENST00000425325 TRIM26Q12899 539 aaPredicted RBP15.18■□□□□ 0.02
AC012354.1-201ENST00000425325 SCAF1Q9H7N4 1312 aaKnown RBP15.14■□□□□ 0.01
AC012354.1-201ENST00000425325 FAM9AQ8IZU1 332 aaPredicted RBP15.13■□□□□ 0.01
AC012354.1-201ENST00000425325 PLPPR3Q6T4P5 718 aa15.11■□□□□ 0.01
AC012354.1-201ENST00000425325 TRIM41Q8WV44 630 aa15.08■□□□□ 0
AC012354.1-201ENST00000425325 KCNA4P22459 653 aa15.06■□□□□ 0
AC012354.1-201ENST00000425325 RSF1Q96T23 1441 aaPredicted RBP15.05■□□□□ 0
AC012354.1-201ENST00000425325 SCRIBQ14160 1630 aa15.05■□□□□ -0
AC012354.1-201ENST00000425325 NACADO15069 1562 aa14.98□□□□□ -0.01
AC012354.1-201ENST00000425325 RB1CC1Q8TDY2 1594 aa14.94□□□□□ -0.02
AC012354.1-201ENST00000425325 CSRNP3Q8WYN3 585 aa14.86□□□□□ -0.03
AC012354.1-201ENST00000425325 ZEB1P37275 1124 aaPredicted RBP14.85□□□□□ -0.03
AC012354.1-201ENST00000425325 CECR2Q9BXF3 1484 aa14.81□□□□□ -0.04
AC012354.1-201ENST00000425325 MROH2BQ7Z745 1585 aa14.73□□□□□ -0.05
AC012354.1-201ENST00000425325 RTN4Q9NQC3 1192 aaKnown RBP14.71□□□□□ -0.05
AC012354.1-201ENST00000425325 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.69□□□□□ -0.06
AC012354.1-201ENST00000425325 MYT1Q01538 1121 aa14.68□□□□□ -0.06
AC012354.1-201ENST00000425325 NEUROD1Q13562 356 aa14.68□□□□□ -0.06
AC012354.1-201ENST00000425325 TTBK1Q5TCY1 1321 aaPredicted RBP14.67□□□□□ -0.06
AC012354.1-201ENST00000425325 ADRA2BP18089 450 aa14.67□□□□□ -0.06
AC012354.1-201ENST00000425325 WIZO95785 1651 aa14.65□□□□□ -0.06
AC012354.1-201ENST00000425325 ACIN1Q9UKV3 1341 aaKnown RBP14.65□□□□□ -0.06
AC012354.1-201ENST00000425325 UNC13AQ9UPW8 1703 aa14.64□□□□□ -0.07
AC012354.1-201ENST00000425325 CCER1Q8TC90 406 aaPredicted RBP14.61□□□□□ -0.07
AC012354.1-201ENST00000425325 GTF3C3Q9Y5Q9 886 aa14.6□□□□□ -0.07
AC012354.1-201ENST00000425325 BICRAQ9NZM4 1560 aa14.52□□□□□ -0.09
AC012354.1-201ENST00000425325 ABCC8Q09428 1581 aa14.48□□□□□ -0.09
AC012354.1-201ENST00000425325 PABPN1Q86U42 306 aaKnown RBP eCLIP14.47□□□□□ -0.09
AC012354.1-201ENST00000425325 BAZ1AQ9NRL2 1556 aaPredicted RBP14.46□□□□□ -0.1
AC012354.1-201ENST00000425325 CCDC88BA6NC98 1476 aa14.46□□□□□ -0.1
AC012354.1-201ENST00000425325 EIF4G1Q04637 1599 aaKnown RBP14.43□□□□□ -0.1
AC012354.1-201ENST00000425325 DIEXFQ68CQ4 756 aaKnown RBP14.41□□□□□ -0.1
AC012354.1-201ENST00000425325 CENPBP07199 599 aaPredicted RBP14.41□□□□□ -0.1
AC012354.1-201ENST00000425325 SOGA1O94964 1423 aa14.41□□□□□ -0.1
AC012354.1-201ENST00000425325 CEP162Q5TB80 1403 aa14.38□□□□□ -0.11
AC012354.1-201ENST00000425325 UBTFP17480 764 aaKnown RBP14.37□□□□□ -0.11
AC012354.1-201ENST00000425325 RUSC2Q8N2Y8 1516 aa14.34□□□□□ -0.11
AC012354.1-201ENST00000425325 TOP2AP11388 1531 aaKnown RBP14.32□□□□□ -0.12
AC012354.1-201ENST00000425325 WRNQ14191 1432 aaPredicted RBP eCLIP14.3□□□□□ -0.12
AC012354.1-201ENST00000425325 SMARCA2P51531 1590 aa14.29□□□□□ -0.12
AC012354.1-201ENST00000425325 SLC4A1APQ9BWU0 796 aaKnown RBP14.29□□□□□ -0.12
AC012354.1-201ENST00000425325 YTHDC1Q96MU7 727 aaKnown RBP14.28□□□□□ -0.12
AC012354.1-201ENST00000425325 TNIKQ9UKE5 1360 aa14.28□□□□□ -0.12
AC012354.1-201ENST00000425325 SMARCA4P51532 1647 aa14.27□□□□□ -0.12
AC012354.1-201ENST00000425325 HNRNPUL2Q1KMD3 747 aaKnown RBP14.24□□□□□ -0.13
AC012354.1-201ENST00000425325 RANGAP1P46060 587 aaPredicted RBP14.22□□□□□ -0.13
AC012354.1-201ENST00000425325 ZNF316A6NFI3 1004 aaPredicted RBP14.2□□□□□ -0.14
AC012354.1-201ENST00000425325 GOLGA3Q08378 1498 aa14.15□□□□□ -0.14
AC012354.1-201ENST00000425325 EEA1Q15075 1411 aa14.13□□□□□ -0.15
AC012354.1-201ENST00000425325 MIER1Q8N108 512 aa14.12□□□□□ -0.15
AC012354.1-201ENST00000425325 PPP6R1Q9UPN7 881 aa14.08□□□□□ -0.16
AC012354.1-201ENST00000425325 CLIP1P30622 1438 aa14.06□□□□□ -0.16
AC012354.1-201ENST00000425325 ZBTB22O15209 634 aa14.05□□□□□ -0.16
AC012354.1-201ENST00000425325 SYNJ1O43426 1573 aa14.05□□□□□ -0.16
AC012354.1-201ENST00000425325 AMER1Q5JTC6 1135 aaPredicted RBP14.04□□□□□ -0.16
AC012354.1-201ENST00000425325 CEP164Q9UPV0 1460 aa14.03□□□□□ -0.16
AC012354.1-201ENST00000425325 APLP2Q06481 763 aa14.03□□□□□ -0.16
AC012354.1-201ENST00000425325 RAPGEF2Q9Y4G8 1499 aa14□□□□□ -0.17
AC012354.1-201ENST00000425325 SENP3Q9H4L4 574 aaPredicted RBP13.99□□□□□ -0.17
AC012354.1-201ENST00000425325 VPS8Q8N3P4 1428 aa13.98□□□□□ -0.17
AC012354.1-201ENST00000425325 BCL11AQ9H165 835 aa13.98□□□□□ -0.17
AC012354.1-201ENST00000425325 CC2D2AQ9P2K1 1620 aa13.95□□□□□ -0.18
AC012354.1-201ENST00000425325 DNAJC5BQ9UF47 199 aa13.95□□□□□ -0.18
AC012354.1-201ENST00000425325 KIF21BO75037 1637 aa13.95□□□□□ -0.18
AC012354.1-201ENST00000425325 PEG3Q9GZU2 1588 aa13.9□□□□□ -0.18
AC012354.1-201ENST00000425325 ATAD2BQ9ULI0 1458 aa13.9□□□□□ -0.18
AC012354.1-201ENST00000425325 BAZ1BQ9UIG0 1483 aaKnown RBP13.89□□□□□ -0.19
AC012354.1-201ENST00000425325 KANK4Q5T7N3 995 aaPredicted RBP13.89□□□□□ -0.19
AC012354.1-201ENST00000425325 ANP32EQ9BTT0 268 aa13.86□□□□□ -0.19
AC012354.1-201ENST00000425325 NCAPD3P42695 1498 aa13.85□□□□□ -0.19
AC012354.1-201ENST00000425325 SUPT16HQ9Y5B9 1047 aaKnown RBP13.84□□□□□ -0.19
AC012354.1-201ENST00000425325 DHX57Q6P158 1386 aaKnown RBP13.83□□□□□ -0.19
AC012354.1-201ENST00000425325 PRKCSHP14314 528 aaPredicted RBP13.83□□□□□ -0.2
AC012354.1-201ENST00000425325 ITGAEP38570 1179 aa13.83□□□□□ -0.2
AC012354.1-201ENST00000425325 TSHZ2Q9NRE2 1034 aa13.82□□□□□ -0.2
AC012354.1-201ENST00000425325 ARAP1Q96P48 1450 aa13.79□□□□□ -0.2
AC012354.1-201ENST00000425325 HMGXB3Q12766 1538 aa13.78□□□□□ -0.2
AC012354.1-201ENST00000425325 TOP2BQ02880 1626 aa13.77□□□□□ -0.21
AC012354.1-201ENST00000425325 PRXQ9BXM0 1461 aa13.74□□□□□ -0.21
AC012354.1-201ENST00000425325 CLSPNQ9HAW4 1339 aa13.71□□□□□ -0.21
AC012354.1-201ENST00000425325 KCNH8Q96L42 1107 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms