Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 FAT3-206ENST00000533797 7894 ntTSL 2 BASIC10□□□□□ -0.81
SLC1A1P43005 NSD2-207ENST00000398261 8390 ntTSL 1 (best) BASIC10□□□□□ -0.81
SLC1A1P43005 PPP4R1L-202ENST00000334187 2746 ntBASIC10□□□□□ -0.81
SLC1A1P43005 CRX-207ENST00000613299 4193 ntTSL 3 BASIC10□□□□□ -0.81
SLC1A1P43005 CEP152-202ENST00000380950 5635 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
SLC1A1P43005 RNF14-205ENST00000394520 4235 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SLC1A1P43005 LRTOMT-201ENST00000289488 2332 ntTSL 1 (best) BASIC10□□□□□ -0.81
SLC1A1P43005 TTC39C-203ENST00000540918 4117 ntTSL 2 BASIC10□□□□□ -0.81
SLC1A1P43005 RTL1-201ENST00000534062 4193 ntAPPRIS P1 BASIC10□□□□□ -0.81
SLC1A1P43005 TRPC3-201ENST00000264811 3675 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
SLC1A1P43005 SZRD1-202ENST00000401089 3447 ntTSL 2 BASIC10□□□□□ -0.81
SLC1A1P43005 FAM13A-212ENST00000508369 3169 ntTSL 5 BASIC10□□□□□ -0.81
SLC1A1P43005 RAF1P1-201ENST00000508566 1696 ntBASIC9.99□□□□□ -0.81
SLC1A1P43005 ZNF345-206ENST00000529555 3527 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
SLC1A1P43005 NFYC-213ENST00000447388 1950 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
SLC1A1P43005 SIRPB1-213ENST00000568365 1701 ntAPPRIS ALT2 TSL 2 BASIC9.99□□□□□ -0.81
SLC1A1P43005 ITGB6-201ENST00000283249 4675 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
SLC1A1P43005 TPD52L3-201ENST00000314556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
SLC1A1P43005 AC013391.3-201ENST00000567484 1456 ntBASIC9.99□□□□□ -0.81
SLC1A1P43005 FIGNL1-206ENST00000433017 3626 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
SLC1A1P43005 LINC02042-201ENST00000481624 2022 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
SLC1A1P43005 BBS9-204ENST00000396127 3914 ntTSL 5 BASIC9.99□□□□□ -0.81
SLC1A1P43005 KCNJ15-208ENST00000398938 2583 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
SLC1A1P43005 CTNNA2-203ENST00000402739 3684 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
SLC1A1P43005 FLNB-AS1-202ENST00000488720 3709 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
SLC1A1P43005 PDZK1-201ENST00000344770 2084 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
SLC1A1P43005 CYP2C9-201ENST00000260682 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
SLC1A1P43005 PTGR1-201ENST00000309195 1223 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
SLC1A1P43005 KRTDAP-201ENST00000338897 491 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
SLC1A1P43005 SNORA5C-201ENST00000364902 137 ntBASIC9.99□□□□□ -0.81
SLC1A1P43005 CD48-202ENST00000368046 1126 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
SLC1A1P43005 AL031575.1-201ENST00000416609 845 ntBASIC9.99□□□□□ -0.81
SLC1A1P43005 AC013480.1-201ENST00000451514 346 ntTSL 5 BASIC9.99□□□□□ -0.81
SLC1A1P43005 RPSAP18-201ENST00000453374 886 ntBASIC9.99□□□□□ -0.81
SLC1A1P43005 AC092159.1-202ENST00000456255 389 ntTSL 3 BASIC9.99□□□□□ -0.81
SLC1A1P43005 RN7SL50P-201ENST00000461146 298 ntBASIC9.99□□□□□ -0.81
SLC1A1P43005 AC104212.1-201ENST00000472088 613 ntBASIC9.99□□□□□ -0.81
SLC1A1P43005 KRTDAP-203ENST00000484218 451 ntTSL 2 BASIC9.99□□□□□ -0.81
SLC1A1P43005 SF3B1-211ENST00000487698 2127 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
SLC1A1P43005 AC139453.1-201ENST00000504027 895 ntBASIC9.99□□□□□ -0.81
SLC1A1P43005 AC106795.2-202ENST00000507072 551 ntTSL 5 BASIC9.99□□□□□ -0.81
SLC1A1P43005 RPPH1-3P-201ENST00000516541 322 ntBASIC9.99□□□□□ -0.81
SLC1A1P43005 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
SLC1A1P43005 AC091144.2-201ENST00000521717 433 ntBASIC9.99□□□□□ -0.81
SLC1A1P43005 AP000797.3-201ENST00000537491 548 ntTSL 4 BASIC9.99□□□□□ -0.81
SLC1A1P43005 PRSS2-201ENST00000539842 795 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
SLC1A1P43005 AL162311.2-201ENST00000550416 709 ntBASIC9.99□□□□□ -0.81
SLC1A1P43005 ALOX12-AS1-209ENST00000575889 439 ntTSL 3 BASIC9.99□□□□□ -0.81
SLC1A1P43005 AC093330.1-205ENST00000580580 737 ntTSL 5 BASIC9.99□□□□□ -0.81
SLC1A1P43005 AF038458.3-201ENST00000592518 500 ntTSL 3 BASIC9.99□□□□□ -0.81
SLC1A1P43005 AC243960.1-202ENST00000601116 601 ntTSL 2 BASIC9.99□□□□□ -0.81
SLC1A1P43005 GNAL-210ENST00000602628 1038 ntTSL 2 BASIC9.99□□□□□ -0.81
SLC1A1P43005 AC091393.1-201ENST00000605088 598 ntBASIC9.99□□□□□ -0.81
SLC1A1P43005 ATP8B1-201ENST00000283684 5818 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
SLC1A1P43005 U91328.2-201ENST00000606723 4130 ntTSL 2 BASIC9.99□□□□□ -0.81
SLC1A1P43005 NHLRC3-203ENST00000470258 3298 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
SLC1A1P43005 NPHP1-207ENST00000445609 2513 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
SLC1A1P43005 NFYC-211ENST00000427410 1379 ntTSL 2 BASIC9.99□□□□□ -0.81
SLC1A1P43005 SLAMF7-206ENST00000458104 2345 ntTSL 2 BASIC9.99□□□□□ -0.81
SLC1A1P43005 SCNM1-202ENST00000368905 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
SLC1A1P43005 LIPT1-202ENST00000393473 1424 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
SLC1A1P43005 MIPOL1-202ENST00000396294 6258 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SLC1A1P43005 ESRRG-207ENST00000366940 5314 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SLC1A1P43005 AC074043.1-201ENST00000483126 1776 ntBASIC9.98□□□□□ -0.81
SLC1A1P43005 NFIB-219ENST00000636735 1471 ntTSL 5 BASIC9.98□□□□□ -0.81
SLC1A1P43005 UVRAG-208ENST00000532130 1831 ntTSL 2 BASIC9.98□□□□□ -0.81
SLC1A1P43005 AC079331.2-201ENST00000623462 2546 ntBASIC9.98□□□□□ -0.81
SLC1A1P43005 PRC1-AS1-201ENST00000554388 1525 ntTSL 2 BASIC9.98□□□□□ -0.81
SLC1A1P43005 ASXL2-202ENST00000404843 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
SLC1A1P43005 SMAD9-203ENST00000399275 5389 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SLC1A1P43005 NTRK3-207ENST00000542733 2287 ntTSL 2 BASIC9.98□□□□□ -0.81
SLC1A1P43005 STAT1-204ENST00000409465 3097 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
SLC1A1P43005 SAA2-201ENST00000256733 563 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SLC1A1P43005 VTA1-201ENST00000367621 1284 ntTSL 5 BASIC9.98□□□□□ -0.81
SLC1A1P43005 RNU1-67P-201ENST00000384446 164 ntBASIC9.98□□□□□ -0.81
SLC1A1P43005 PRYP1-201ENST00000412474 445 ntBASIC9.98□□□□□ -0.81
SLC1A1P43005 SAA2-202ENST00000414546 1022 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
SLC1A1P43005 FAM192BP-201ENST00000414628 762 ntBASIC9.98□□□□□ -0.81
SLC1A1P43005 PRYP2-201ENST00000416652 492 ntBASIC9.98□□□□□ -0.81
SLC1A1P43005 AC113607.1-201ENST00000427019 589 ntTSL 4 BASIC9.98□□□□□ -0.81
SLC1A1P43005 AL022324.1-201ENST00000433457 663 ntBASIC9.98□□□□□ -0.81
SLC1A1P43005 POLR2H-206ENST00000452961 791 ntTSL 2 BASIC9.98□□□□□ -0.81
SLC1A1P43005 PSMB3P2-201ENST00000457237 618 ntBASIC9.98□□□□□ -0.81
SLC1A1P43005 TRMT112P5-201ENST00000511173 334 ntBASIC9.98□□□□□ -0.81
SLC1A1P43005 AC010343.3-201ENST00000512323 446 ntTSL 3 BASIC9.98□□□□□ -0.81
SLC1A1P43005 SAA1-203ENST00000532858 583 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SLC1A1P43005 AP001880.1-201ENST00000538772 421 ntBASIC9.98□□□□□ -0.81
SLC1A1P43005 AC078923.1-202ENST00000552466 712 ntTSL 5 BASIC9.98□□□□□ -0.81
SLC1A1P43005 AC010760.1-201ENST00000565129 545 ntTSL 2 BASIC9.98□□□□□ -0.81
SLC1A1P43005 AC113349.2-201ENST00000607804 377 ntBASIC9.98□□□□□ -0.81
SLC1A1P43005 AL138995.1-201ENST00000614633 675 ntBASIC9.98□□□□□ -0.81
SLC1A1P43005 FO538757.2-201ENST00000624431 570 ntBASIC9.98□□□□□ -0.81
SLC1A1P43005 AK2-214ENST00000626911 160 ntTSL 3 BASIC9.98□□□□□ -0.81
SLC1A1P43005 TARS-216ENST00000627006 171 ntTSL 5 BASIC9.98□□□□□ -0.81
SLC1A1P43005 AC135068.7-201ENST00000630145 568 ntTSL 2 BASIC9.98□□□□□ -0.81
SLC1A1P43005 FAM240B-201ENST00000637493 1160 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
SLC1A1P43005 KF456110.1-201ENST00000641105 385 ntBASIC9.98□□□□□ -0.81
SLC1A1P43005 AC091939.1-202ENST00000642039 795 ntBASIC9.98□□□□□ -0.81
SLC1A1P43005 SLC11A2-212ENST00000547688 2401 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
SLC1A1P43005 FHL1-201ENST00000345434 2458 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms