RNA–Protein interactions for RNA: ENST00000344770.6

PDZK1-201, Transcript of PDZ domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDZK1, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZK1-201ENST00000344770 NISCHQ9Y2I1 1504 aa20.8■□□□□ 0.92
PDZK1-201ENST00000344770 SLC24A1O60721 1099 aa18.63■□□□□ 0.57
PDZK1-201ENST00000344770 CCDC180Q9P1Z9 1646 aa18.59■□□□□ 0.57
PDZK1-201ENST00000344770 ABCC9O60706 1549 aa18.31■□□□□ 0.52
PDZK1-201ENST00000344770 MYT1Q01538 1121 aa17.95■□□□□ 0.46
PDZK1-201ENST00000344770 PELP1Q8IZL8 1130 aaKnown RBP17.76■□□□□ 0.43
PDZK1-201ENST00000344770 TTBK1Q5TCY1 1321 aaPredicted RBP17.71■□□□□ 0.43
PDZK1-201ENST00000344770 RB1CC1Q8TDY2 1594 aa17.57■□□□□ 0.4
PDZK1-201ENST00000344770 NACADO15069 1562 aa17.51■□□□□ 0.39
PDZK1-201ENST00000344770 DCAF8L2P0C7V8 631 aa17.38■□□□□ 0.37
PDZK1-201ENST00000344770 MYO15BQ96JP2 1530 aa17.37■□□□□ 0.37
PDZK1-201ENST00000344770 DAXXQ9UER7 740 aaPredicted RBP17.34■□□□□ 0.37
PDZK1-201ENST00000344770 ZCCHC6Q5VYS8 1495 aaKnown RBP17.3■□□□□ 0.36
PDZK1-201ENST00000344770 PRKCSHP14314 528 aaPredicted RBP17.24■□□□□ 0.35
PDZK1-201ENST00000344770 DCAF1Q9Y4B6 1507 aa17.23■□□□□ 0.35
PDZK1-201ENST00000344770 APLP2Q06481 763 aa17.19■□□□□ 0.34
PDZK1-201ENST00000344770 UNC13AQ9UPW8 1703 aa17.12■□□□□ 0.33
PDZK1-201ENST00000344770 ERICH6Q7L0X2 663 aa17.1■□□□□ 0.33
PDZK1-201ENST00000344770 PABPN1Q86U42 306 aaKnown RBP eCLIP17.05■□□□□ 0.32
PDZK1-201ENST00000344770 BICRAQ9NZM4 1560 aa17.03■□□□□ 0.32
PDZK1-201ENST00000344770 DNAJC5BQ9UF47 199 aa16.93■□□□□ 0.3
PDZK1-201ENST00000344770 SCRIBQ14160 1630 aa16.91■□□□□ 0.3
PDZK1-201ENST00000344770 SHROOM4Q9ULL8 1493 aa16.9■□□□□ 0.3
PDZK1-201ENST00000344770 EIF4G1Q04637 1599 aaKnown RBP16.6■□□□□ 0.25
PDZK1-201ENST00000344770 NCBP3Q53F19 620 aaKnown RBP16.58■□□□□ 0.24
PDZK1-201ENST00000344770 CC2D2AQ9P2K1 1620 aa16.57■□□□□ 0.24
PDZK1-201ENST00000344770 CECR2Q9BXF3 1484 aa16.49■□□□□ 0.23
PDZK1-201ENST00000344770 EHMT2Q96KQ7 1210 aa16.37■□□□□ 0.21
PDZK1-201ENST00000344770 PLPPR3Q6T4P5 718 aa16.3■□□□□ 0.2
PDZK1-201ENST00000344770 RTN4Q9NQC3 1192 aaKnown RBP16.26■□□□□ 0.19
PDZK1-201ENST00000344770 SMARCA4P51532 1647 aa16.17■□□□□ 0.18
PDZK1-201ENST00000344770 NCAPD3P42695 1498 aa16.16■□□□□ 0.18
PDZK1-201ENST00000344770 BAZ1AQ9NRL2 1556 aaPredicted RBP16.14■□□□□ 0.17
PDZK1-201ENST00000344770 EIF5BO60841 1220 aaKnown RBP16.13■□□□□ 0.17
PDZK1-201ENST00000344770 ATAD2BQ9ULI0 1458 aa16.13■□□□□ 0.17
PDZK1-201ENST00000344770 SMARCA2P51531 1590 aa16.12■□□□□ 0.17
PDZK1-201ENST00000344770 ARXQ96QS3 562 aa16.11■□□□□ 0.17
PDZK1-201ENST00000344770 HMGXB3Q12766 1538 aa16.07■□□□□ 0.16
PDZK1-201ENST00000344770 PEG3Q9GZU2 1588 aa16.04■□□□□ 0.16
PDZK1-201ENST00000344770 MROH2BQ7Z745 1585 aa16.01■□□□□ 0.15
PDZK1-201ENST00000344770 BAZ1BQ9UIG0 1483 aaKnown RBP15.99■□□□□ 0.15
PDZK1-201ENST00000344770 BCL11AQ9H165 835 aa15.9■□□□□ 0.14
PDZK1-201ENST00000344770 RANGAP1P46060 587 aaPredicted RBP15.87■□□□□ 0.13
PDZK1-201ENST00000344770 ERCC6Q03468 1493 aa15.82■□□□□ 0.12
PDZK1-201ENST00000344770 HRCP23327 699 aa15.82■□□□□ 0.12
PDZK1-201ENST00000344770 AMER1Q5JTC6 1135 aaPredicted RBP15.82■□□□□ 0.12
PDZK1-201ENST00000344770 TIMELESSQ9UNS1 1208 aa15.82■□□□□ 0.12
PDZK1-201ENST00000344770 WIZO95785 1651 aa15.81■□□□□ 0.12
PDZK1-201ENST00000344770 NESP48681 1621 aa15.79■□□□□ 0.12
PDZK1-201ENST00000344770 RSF1Q96T23 1441 aaPredicted RBP15.77■□□□□ 0.11
PDZK1-201ENST00000344770 LAMC3Q9Y6N6 1575 aa15.76■□□□□ 0.11
PDZK1-201ENST00000344770 CUX2O14529 1486 aa15.73■□□□□ 0.11
PDZK1-201ENST00000344770 TOP2AP11388 1531 aaKnown RBP15.67■□□□□ 0.1
PDZK1-201ENST00000344770 CADPSQ9ULU8 1353 aa15.66■□□□□ 0.1
PDZK1-201ENST00000344770 PDS5BQ9NTI5 1447 aa15.65■□□□□ 0.1
PDZK1-201ENST00000344770 KLHL34Q8N239 644 aa15.63■□□□□ 0.09
PDZK1-201ENST00000344770 THOC2Q8NI27 1593 aaKnown RBP15.62■□□□□ 0.09
PDZK1-201ENST00000344770 KIF21AQ7Z4S6 1674 aa15.6■□□□□ 0.09
PDZK1-201ENST00000344770 PLEKHG5O94827 1062 aa15.58■□□□□ 0.09
PDZK1-201ENST00000344770 FAM9AQ8IZU1 332 aaPredicted RBP15.57■□□□□ 0.08
PDZK1-201ENST00000344770 CFTRP13569 1480 aa15.55■□□□□ 0.08
PDZK1-201ENST00000344770 HOMEZQ8IX15 550 aa15.55■□□□□ 0.08
PDZK1-201ENST00000344770 TULP1O00294 542 aaPredicted RBP15.52■□□□□ 0.07
PDZK1-201ENST00000344770 MRC2Q9UBG0 1479 aa15.51■□□□□ 0.07
PDZK1-201ENST00000344770 CEP164Q9UPV0 1460 aa15.49■□□□□ 0.07
PDZK1-201ENST00000344770 FANCD2Q9BXW9 1451 aa15.49■□□□□ 0.07
PDZK1-201ENST00000344770 WDR62O43379 1518 aa15.47■□□□□ 0.07
PDZK1-201ENST00000344770 CCDC88BA6NC98 1476 aa15.46■□□□□ 0.07
PDZK1-201ENST00000344770 DNAJC5Q9H3Z4 198 aa15.41■□□□□ 0.06
PDZK1-201ENST00000344770 PRDM2Q13029 1718 aa15.4■□□□□ 0.06
PDZK1-201ENST00000344770 KCNA4P22459 653 aa15.39■□□□□ 0.05
PDZK1-201ENST00000344770 URB2Q14146 1524 aaKnown RBP15.34■□□□□ 0.05
PDZK1-201ENST00000344770 PODXL2Q9NZ53 605 aa15.32■□□□□ 0.04
PDZK1-201ENST00000344770 TAOK2Q9UL54 1235 aa15.29■□□□□ 0.04
PDZK1-201ENST00000344770 CHIC1Q5VXU3 224 aa15.29■□□□□ 0.04
PDZK1-201ENST00000344770 ABCC8Q09428 1581 aa15.23■□□□□ 0.03
PDZK1-201ENST00000344770 TOPBP1Q92547 1522 aa15.22■□□□□ 0.03
PDZK1-201ENST00000344770 DNMBPQ6XZF7 1577 aa15.2■□□□□ 0.02
PDZK1-201ENST00000344770 SUPT5HO00267 1087 aaKnown RBP15.19■□□□□ 0.02
PDZK1-201ENST00000344770 IFT140Q96RY7 1462 aa15.18■□□□□ 0.02
PDZK1-201ENST00000344770 SCAF1Q9H7N4 1312 aaKnown RBP15.13■□□□□ 0.01
PDZK1-201ENST00000344770 UBE2Q2Q8WVN8 375 aa15.1■□□□□ 0.01
PDZK1-201ENST00000344770 ZNF608Q9ULD9 1512 aaPredicted RBP15.1■□□□□ 0.01
PDZK1-201ENST00000344770 POLA1P09884 1462 aaPredicted RBP15.08■□□□□ 0
PDZK1-201ENST00000344770 CSRNP3Q8WYN3 585 aa15.07■□□□□ 0
PDZK1-201ENST00000344770 TARBP1Q13395 1621 aaKnown RBP15.07■□□□□ 0
PDZK1-201ENST00000344770 EIF4G3O43432 1585 aaKnown RBP15.06■□□□□ 0
PDZK1-201ENST00000344770 NPM2Q86SE8 214 aaKnown RBP15.05■□□□□ 0
PDZK1-201ENST00000344770 TPRNQ4KMQ1 711 aa15.04■□□□□ -0
PDZK1-201ENST00000344770 PPARGC1BQ86YN6 1023 aaKnown RBP15.04■□□□□ -0
PDZK1-201ENST00000344770 CUX1P39880 1505 aa15.03■□□□□ -0
PDZK1-201ENST00000344770 FGD5Q6ZNL6 1462 aa15.02□□□□□ -0.01
PDZK1-201ENST00000344770 OSCARQ8IYS5 282 aa15.01□□□□□ -0.01
PDZK1-201ENST00000344770 BCANQ96GW7 911 aa15□□□□□ -0.01
PDZK1-201ENST00000344770 SOGA1O94964 1423 aa15□□□□□ -0.01
PDZK1-201ENST00000344770 RAD54L2Q9Y4B4 1467 aa14.99□□□□□ -0.01
PDZK1-201ENST00000344770 AQRO60306 1485 aaKnown RBP eCLIP14.98□□□□□ -0.01
PDZK1-201ENST00000344770 WDR97A6NE52 1622 aa14.97□□□□□ -0.01
PDZK1-201ENST00000344770 PDIA4P13667 645 aaKnown RBP14.96□□□□□ -0.02
PDZK1-201ENST00000344770 GTF3C3Q9Y5Q9 886 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms