Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 AC018470.1-201ENST00000624790 3129 ntBASIC14.23□□□□□ -0.13
SPCS1Q9Y6A9 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC14.23□□□□□ -0.13
SPCS1Q9Y6A9 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPCS1Q9Y6A9 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPCS1Q9Y6A9 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC14.22□□□□□ -0.13
SPCS1Q9Y6A9 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC14.22□□□□□ -0.13
SPCS1Q9Y6A9 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPCS1Q9Y6A9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC14.22□□□□□ -0.13
SPCS1Q9Y6A9 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC14.22□□□□□ -0.13
SPCS1Q9Y6A9 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPCS1Q9Y6A9 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SPCS1Q9Y6A9 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC14.22□□□□□ -0.13
SPCS1Q9Y6A9 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
SPCS1Q9Y6A9 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC14.22□□□□□ -0.13
SPCS1Q9Y6A9 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPCS1Q9Y6A9 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC14.22□□□□□ -0.13
SPCS1Q9Y6A9 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC14.22□□□□□ -0.13
SPCS1Q9Y6A9 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPCS1Q9Y6A9 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SPCS1Q9Y6A9 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.22□□□□□ -0.13
SPCS1Q9Y6A9 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPCS1Q9Y6A9 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPCS1Q9Y6A9 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPCS1Q9Y6A9 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPCS1Q9Y6A9 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPCS1Q9Y6A9 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SPCS1Q9Y6A9 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SPCS1Q9Y6A9 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPCS1Q9Y6A9 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SPCS1Q9Y6A9 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SPCS1Q9Y6A9 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPCS1Q9Y6A9 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SPCS1Q9Y6A9 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPCS1Q9Y6A9 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPCS1Q9Y6A9 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPCS1Q9Y6A9 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC14.21□□□□□ -0.13
SPCS1Q9Y6A9 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPCS1Q9Y6A9 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SPCS1Q9Y6A9 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SPCS1Q9Y6A9 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SPCS1Q9Y6A9 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC14.21□□□□□ -0.13
SPCS1Q9Y6A9 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SPCS1Q9Y6A9 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPCS1Q9Y6A9 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SPCS1Q9Y6A9 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPCS1Q9Y6A9 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPCS1Q9Y6A9 RPS2-210ENST00000530225 765 ntTSL 2 BASIC14.21□□□□□ -0.13
SPCS1Q9Y6A9 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPCS1Q9Y6A9 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SPCS1Q9Y6A9 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPCS1Q9Y6A9 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
SPCS1Q9Y6A9 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SPCS1Q9Y6A9 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SPCS1Q9Y6A9 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SPCS1Q9Y6A9 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SPCS1Q9Y6A9 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC14.21□□□□□ -0.14
SPCS1Q9Y6A9 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
SPCS1Q9Y6A9 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS1Q9Y6A9 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS1Q9Y6A9 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SPCS1Q9Y6A9 AC079598.2-202ENST00000546624 1451 ntBASIC14.2□□□□□ -0.14
SPCS1Q9Y6A9 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS1Q9Y6A9 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.2□□□□□ -0.14
SPCS1Q9Y6A9 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SPCS1Q9Y6A9 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS1Q9Y6A9 AL353803.4-201ENST00000565882 1934 ntBASIC14.2□□□□□ -0.14
SPCS1Q9Y6A9 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SPCS1Q9Y6A9 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS1Q9Y6A9 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC14.2□□□□□ -0.14
SPCS1Q9Y6A9 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS1Q9Y6A9 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS1Q9Y6A9 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS1Q9Y6A9 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS1Q9Y6A9 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SPCS1Q9Y6A9 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
SPCS1Q9Y6A9 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS1Q9Y6A9 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS1Q9Y6A9 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS1Q9Y6A9 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS1Q9Y6A9 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC14.2□□□□□ -0.14
SPCS1Q9Y6A9 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS1Q9Y6A9 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SPCS1Q9Y6A9 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS1Q9Y6A9 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS1Q9Y6A9 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPCS1Q9Y6A9 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC14.19□□□□□ -0.14
SPCS1Q9Y6A9 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPCS1Q9Y6A9 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPCS1Q9Y6A9 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPCS1Q9Y6A9 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
SPCS1Q9Y6A9 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.19□□□□□ -0.14
SPCS1Q9Y6A9 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPCS1Q9Y6A9 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC14.19□□□□□ -0.14
SPCS1Q9Y6A9 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SPCS1Q9Y6A9 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SPCS1Q9Y6A9 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPCS1Q9Y6A9 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPCS1Q9Y6A9 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPCS1Q9Y6A9 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPCS1Q9Y6A9 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms