Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 BID-204ENST00000399767 2129 ntTSL 2 BASIC14.38□□□□□ -0.11
UBE2D4Q9Y2X8 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2D4Q9Y2X8 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2D4Q9Y2X8 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC14.38□□□□□ -0.11
UBE2D4Q9Y2X8 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBE2D4Q9Y2X8 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBE2D4Q9Y2X8 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBE2D4Q9Y2X8 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBE2D4Q9Y2X8 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
UBE2D4Q9Y2X8 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBE2D4Q9Y2X8 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBE2D4Q9Y2X8 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC14.37□□□□□ -0.11
UBE2D4Q9Y2X8 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UBE2D4Q9Y2X8 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBE2D4Q9Y2X8 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UBE2D4Q9Y2X8 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC14.37□□□□□ -0.11
UBE2D4Q9Y2X8 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UBE2D4Q9Y2X8 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC14.37□□□□□ -0.11
UBE2D4Q9Y2X8 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC14.37□□□□□ -0.11
UBE2D4Q9Y2X8 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
UBE2D4Q9Y2X8 AL035685.1-201ENST00000636663 812 ntBASIC14.37□□□□□ -0.11
UBE2D4Q9Y2X8 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
UBE2D4Q9Y2X8 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC14.37□□□□□ -0.11
UBE2D4Q9Y2X8 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBE2D4Q9Y2X8 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
UBE2D4Q9Y2X8 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBE2D4Q9Y2X8 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBE2D4Q9Y2X8 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
UBE2D4Q9Y2X8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
UBE2D4Q9Y2X8 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBE2D4Q9Y2X8 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBE2D4Q9Y2X8 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBE2D4Q9Y2X8 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBE2D4Q9Y2X8 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBE2D4Q9Y2X8 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC14.36□□□□□ -0.11
UBE2D4Q9Y2X8 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC14.36□□□□□ -0.11
UBE2D4Q9Y2X8 BX005040.4-201ENST00000637145 1518 ntBASIC14.36□□□□□ -0.11
UBE2D4Q9Y2X8 AC055733.4-201ENST00000638462 1354 ntBASIC14.36□□□□□ -0.11
UBE2D4Q9Y2X8 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UBE2D4Q9Y2X8 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
UBE2D4Q9Y2X8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBE2D4Q9Y2X8 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC14.36□□□□□ -0.11
UBE2D4Q9Y2X8 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
UBE2D4Q9Y2X8 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UBE2D4Q9Y2X8 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UBE2D4Q9Y2X8 FXN-202ENST00000396364 980 ntTSL 5 BASIC14.36□□□□□ -0.11
UBE2D4Q9Y2X8 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UBE2D4Q9Y2X8 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
UBE2D4Q9Y2X8 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UBE2D4Q9Y2X8 AC099778.1-201ENST00000568593 1911 ntBASIC14.36□□□□□ -0.11
UBE2D4Q9Y2X8 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBE2D4Q9Y2X8 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBE2D4Q9Y2X8 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
UBE2D4Q9Y2X8 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
UBE2D4Q9Y2X8 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC14.36□□□□□ -0.11
UBE2D4Q9Y2X8 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBE2D4Q9Y2X8 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
UBE2D4Q9Y2X8 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
UBE2D4Q9Y2X8 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC14.36□□□□□ -0.11
UBE2D4Q9Y2X8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC14.36□□□□□ -0.11
UBE2D4Q9Y2X8 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UBE2D4Q9Y2X8 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBE2D4Q9Y2X8 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
UBE2D4Q9Y2X8 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2D4Q9Y2X8 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2D4Q9Y2X8 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2D4Q9Y2X8 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2D4Q9Y2X8 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC14.35□□□□□ -0.11
UBE2D4Q9Y2X8 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC14.35□□□□□ -0.11
UBE2D4Q9Y2X8 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
UBE2D4Q9Y2X8 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC14.35□□□□□ -0.11
UBE2D4Q9Y2X8 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2D4Q9Y2X8 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2D4Q9Y2X8 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC14.35□□□□□ -0.11
UBE2D4Q9Y2X8 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2D4Q9Y2X8 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2D4Q9Y2X8 RPP21-222ENST00000433076 577 ntTSL 2 BASIC14.35□□□□□ -0.11
UBE2D4Q9Y2X8 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC14.35□□□□□ -0.11
UBE2D4Q9Y2X8 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2D4Q9Y2X8 AC133561.4-201ENST00000566112 224 ntBASIC14.35□□□□□ -0.11
UBE2D4Q9Y2X8 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC14.35□□□□□ -0.11
UBE2D4Q9Y2X8 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC14.35□□□□□ -0.11
UBE2D4Q9Y2X8 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC14.35□□□□□ -0.11
UBE2D4Q9Y2X8 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC14.35□□□□□ -0.11
UBE2D4Q9Y2X8 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
UBE2D4Q9Y2X8 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
UBE2D4Q9Y2X8 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2D4Q9Y2X8 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2D4Q9Y2X8 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2D4Q9Y2X8 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC14.34□□□□□ -0.11
UBE2D4Q9Y2X8 AC011484.1-201ENST00000377652 1995 ntBASIC14.34□□□□□ -0.11
UBE2D4Q9Y2X8 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC14.34□□□□□ -0.11
UBE2D4Q9Y2X8 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2D4Q9Y2X8 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2D4Q9Y2X8 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2D4Q9Y2X8 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2D4Q9Y2X8 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC14.34□□□□□ -0.11
UBE2D4Q9Y2X8 EXOC3-AS1-202ENST00000623673 1663 ntBASIC14.34□□□□□ -0.11
UBE2D4Q9Y2X8 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2D4Q9Y2X8 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms