Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RCL1Q9Y2P8 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RCL1Q9Y2P8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
RCL1Q9Y2P8 SMG8-203ENST00000578922 2178 ntBASIC16.88■□□□□ 0.29
RCL1Q9Y2P8 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RCL1Q9Y2P8 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.88■□□□□ 0.29
RCL1Q9Y2P8 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.87■□□□□ 0.29
RCL1Q9Y2P8 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RCL1Q9Y2P8 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.87■□□□□ 0.29
RCL1Q9Y2P8 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
RCL1Q9Y2P8 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RCL1Q9Y2P8 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RCL1Q9Y2P8 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RCL1Q9Y2P8 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.87■□□□□ 0.29
RCL1Q9Y2P8 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RCL1Q9Y2P8 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC16.87■□□□□ 0.29
RCL1Q9Y2P8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC16.87■□□□□ 0.29
RCL1Q9Y2P8 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RCL1Q9Y2P8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.87■□□□□ 0.29
RCL1Q9Y2P8 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC16.87■□□□□ 0.29
RCL1Q9Y2P8 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RCL1Q9Y2P8 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RCL1Q9Y2P8 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
RCL1Q9Y2P8 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
RCL1Q9Y2P8 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RCL1Q9Y2P8 FP700111.2-201ENST00000619190 1892 ntBASIC16.86■□□□□ 0.29
RCL1Q9Y2P8 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RCL1Q9Y2P8 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RCL1Q9Y2P8 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
RCL1Q9Y2P8 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RCL1Q9Y2P8 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC16.86■□□□□ 0.29
RCL1Q9Y2P8 KRT125P-201ENST00000546827 989 ntBASIC16.86■□□□□ 0.29
RCL1Q9Y2P8 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
RCL1Q9Y2P8 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RCL1Q9Y2P8 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RCL1Q9Y2P8 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RCL1Q9Y2P8 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RCL1Q9Y2P8 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RCL1Q9Y2P8 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
RCL1Q9Y2P8 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RCL1Q9Y2P8 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
RCL1Q9Y2P8 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RCL1Q9Y2P8 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RCL1Q9Y2P8 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RCL1Q9Y2P8 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RCL1Q9Y2P8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RCL1Q9Y2P8 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC16.85■□□□□ 0.29
RCL1Q9Y2P8 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC16.85■□□□□ 0.29
RCL1Q9Y2P8 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RCL1Q9Y2P8 AL033527.3-201ENST00000566366 1196 ntBASIC16.85■□□□□ 0.29
RCL1Q9Y2P8 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
RCL1Q9Y2P8 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
RCL1Q9Y2P8 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RCL1Q9Y2P8 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RCL1Q9Y2P8 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RCL1Q9Y2P8 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RCL1Q9Y2P8 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RCL1Q9Y2P8 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RCL1Q9Y2P8 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.85■□□□□ 0.29
RCL1Q9Y2P8 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.84■□□□□ 0.29
RCL1Q9Y2P8 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
RCL1Q9Y2P8 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RCL1Q9Y2P8 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.84■□□□□ 0.29
RCL1Q9Y2P8 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RCL1Q9Y2P8 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
RCL1Q9Y2P8 RNF146-205ENST00000477776 762 ntTSL 3 BASIC16.84■□□□□ 0.29
RCL1Q9Y2P8 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
RCL1Q9Y2P8 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RCL1Q9Y2P8 AC012354.3-201ENST00000623734 483 ntBASIC16.84■□□□□ 0.29
RCL1Q9Y2P8 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC16.84■□□□□ 0.29
RCL1Q9Y2P8 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RCL1Q9Y2P8 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RCL1Q9Y2P8 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC16.84■□□□□ 0.29
RCL1Q9Y2P8 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.84■□□□□ 0.29
RCL1Q9Y2P8 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RCL1Q9Y2P8 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.84■□□□□ 0.29
RCL1Q9Y2P8 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RCL1Q9Y2P8 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.84■□□□□ 0.29
RCL1Q9Y2P8 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.84■□□□□ 0.29
RCL1Q9Y2P8 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RCL1Q9Y2P8 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RCL1Q9Y2P8 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RCL1Q9Y2P8 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RCL1Q9Y2P8 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RCL1Q9Y2P8 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RCL1Q9Y2P8 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RCL1Q9Y2P8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC16.83■□□□□ 0.28
RCL1Q9Y2P8 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RCL1Q9Y2P8 AC010525.1-201ENST00000585559 441 ntBASIC16.83■□□□□ 0.28
RCL1Q9Y2P8 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RCL1Q9Y2P8 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RCL1Q9Y2P8 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCL1Q9Y2P8 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCL1Q9Y2P8 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
RCL1Q9Y2P8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RCL1Q9Y2P8 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.82■□□□□ 0.28
RCL1Q9Y2P8 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.82■□□□□ 0.28
RCL1Q9Y2P8 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCL1Q9Y2P8 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RCL1Q9Y2P8 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms