Protein–RNA interactions for Protein: Q9UQR0

SCML2, Sex comb on midleg-like protein 2, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML2Q9UQR0 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCML2Q9UQR0 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCML2Q9UQR0 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.6■■□□□ 1.05
SCML2Q9UQR0 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SCML2Q9UQR0 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.6■■□□□ 1.05
SCML2Q9UQR0 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.6■■□□□ 1.05
SCML2Q9UQR0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCML2Q9UQR0 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCML2Q9UQR0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
SCML2Q9UQR0 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
SCML2Q9UQR0 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCML2Q9UQR0 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SCML2Q9UQR0 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
SCML2Q9UQR0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCML2Q9UQR0 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.6■■□□□ 1.05
SCML2Q9UQR0 AL049796.1-201ENST00000565336 1766 ntBASIC21.59■■□□□ 1.05
SCML2Q9UQR0 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCML2Q9UQR0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
SCML2Q9UQR0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SCML2Q9UQR0 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.59■■□□□ 1.05
SCML2Q9UQR0 AL355472.2-201ENST00000422958 438 ntBASIC21.59■■□□□ 1.05
SCML2Q9UQR0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.59■■□□□ 1.05
SCML2Q9UQR0 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.59■■□□□ 1.05
SCML2Q9UQR0 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.59■■□□□ 1.05
SCML2Q9UQR0 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.59■■□□□ 1.05
SCML2Q9UQR0 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.59■■□□□ 1.05
SCML2Q9UQR0 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
SCML2Q9UQR0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SCML2Q9UQR0 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SCML2Q9UQR0 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCML2Q9UQR0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.59■■□□□ 1.05
SCML2Q9UQR0 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SCML2Q9UQR0 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.58■■□□□ 1.05
SCML2Q9UQR0 FEM1AP4-201ENST00000443167 1987 ntBASIC21.58■■□□□ 1.05
SCML2Q9UQR0 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
SCML2Q9UQR0 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SCML2Q9UQR0 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SCML2Q9UQR0 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SCML2Q9UQR0 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SCML2Q9UQR0 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.58■■□□□ 1.05
SCML2Q9UQR0 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.58■■□□□ 1.05
SCML2Q9UQR0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.58■■□□□ 1.05
SCML2Q9UQR0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
SCML2Q9UQR0 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.58■■□□□ 1.05
SCML2Q9UQR0 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
SCML2Q9UQR0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
SCML2Q9UQR0 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SCML2Q9UQR0 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SCML2Q9UQR0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
SCML2Q9UQR0 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
SCML2Q9UQR0 CYP21A1P-202ENST00000354927 1481 ntBASIC21.58■■□□□ 1.04
SCML2Q9UQR0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCML2Q9UQR0 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.57■■□□□ 1.04
SCML2Q9UQR0 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
SCML2Q9UQR0 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCML2Q9UQR0 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
SCML2Q9UQR0 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.57■■□□□ 1.04
SCML2Q9UQR0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCML2Q9UQR0 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.57■■□□□ 1.04
SCML2Q9UQR0 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
SCML2Q9UQR0 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.57■■□□□ 1.04
SCML2Q9UQR0 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
SCML2Q9UQR0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCML2Q9UQR0 AC011484.1-201ENST00000377652 1995 ntBASIC21.57■■□□□ 1.04
SCML2Q9UQR0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCML2Q9UQR0 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCML2Q9UQR0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
SCML2Q9UQR0 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SCML2Q9UQR0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
SCML2Q9UQR0 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SCML2Q9UQR0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.56■■□□□ 1.04
SCML2Q9UQR0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
SCML2Q9UQR0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.56■■□□□ 1.04
SCML2Q9UQR0 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SCML2Q9UQR0 KRT17P1-201ENST00000399211 1546 ntBASIC21.56■■□□□ 1.04
SCML2Q9UQR0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.56■■□□□ 1.04
SCML2Q9UQR0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SCML2Q9UQR0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.56■■□□□ 1.04
SCML2Q9UQR0 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SCML2Q9UQR0 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SCML2Q9UQR0 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.56■■□□□ 1.04
SCML2Q9UQR0 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SCML2Q9UQR0 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.56■■□□□ 1.04
SCML2Q9UQR0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.56■■□□□ 1.04
SCML2Q9UQR0 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SCML2Q9UQR0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SCML2Q9UQR0 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SCML2Q9UQR0 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.55■■□□□ 1.04
SCML2Q9UQR0 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SCML2Q9UQR0 KRT18P68-201ENST00000392293 1000 ntBASIC21.55■■□□□ 1.04
SCML2Q9UQR0 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.55■■□□□ 1.04
SCML2Q9UQR0 LSM12P1-201ENST00000411836 588 ntBASIC21.55■■□□□ 1.04
SCML2Q9UQR0 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.55■■□□□ 1.04
SCML2Q9UQR0 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.55■■□□□ 1.04
SCML2Q9UQR0 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SCML2Q9UQR0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.55■■□□□ 1.04
SCML2Q9UQR0 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
SCML2Q9UQR0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SCML2Q9UQR0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SCML2Q9UQR0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms