Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC8.65□□□□□ -1.03
MACF1Q9UPN3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC8.65□□□□□ -1.03
MACF1Q9UPN3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
MACF1Q9UPN3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
MACF1Q9UPN3 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
MACF1Q9UPN3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
MACF1Q9UPN3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC8.64□□□□□ -1.03
MACF1Q9UPN3 AC140113.2-201ENST00000604370 208 ntBASIC8.64□□□□□ -1.03
MACF1Q9UPN3 AL390719.2-201ENST00000606993 987 ntBASIC8.64□□□□□ -1.03
MACF1Q9UPN3 AC069148.1-201ENST00000608741 768 ntBASIC8.64□□□□□ -1.03
MACF1Q9UPN3 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
MACF1Q9UPN3 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
MACF1Q9UPN3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC8.64□□□□□ -1.03
MACF1Q9UPN3 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC8.64□□□□□ -1.03
MACF1Q9UPN3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC8.64□□□□□ -1.03
MACF1Q9UPN3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC8.64□□□□□ -1.03
MACF1Q9UPN3 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
MACF1Q9UPN3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC8.64□□□□□ -1.03
MACF1Q9UPN3 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
MACF1Q9UPN3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC8.64□□□□□ -1.03
MACF1Q9UPN3 AC139426.1-201ENST00000568218 2529 ntBASIC8.64□□□□□ -1.03
MACF1Q9UPN3 SLC25A6P4-201ENST00000586535 553 ntBASIC8.64□□□□□ -1.03
MACF1Q9UPN3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC8.64□□□□□ -1.03
MACF1Q9UPN3 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
MACF1Q9UPN3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC8.64□□□□□ -1.03
MACF1Q9UPN3 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC8.64□□□□□ -1.03
MACF1Q9UPN3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
MACF1Q9UPN3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
MACF1Q9UPN3 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC8.64□□□□□ -1.03
MACF1Q9UPN3 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC8.64□□□□□ -1.03
MACF1Q9UPN3 RNF152P1-201ENST00000397754 604 ntBASIC8.64□□□□□ -1.03
MACF1Q9UPN3 AL390955.1-201ENST00000428694 934 ntBASIC8.64□□□□□ -1.03
MACF1Q9UPN3 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC8.64□□□□□ -1.03
MACF1Q9UPN3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC8.64□□□□□ -1.03
MACF1Q9UPN3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC8.64□□□□□ -1.03
MACF1Q9UPN3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC8.64□□□□□ -1.03
MACF1Q9UPN3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC8.64□□□□□ -1.03
MACF1Q9UPN3 AL445675.2-201ENST00000620291 557 ntBASIC8.64□□□□□ -1.03
MACF1Q9UPN3 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC8.64□□□□□ -1.03
MACF1Q9UPN3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
MACF1Q9UPN3 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC8.64□□□□□ -1.03
MACF1Q9UPN3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
MACF1Q9UPN3 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
MACF1Q9UPN3 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
MACF1Q9UPN3 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
MACF1Q9UPN3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC8.64□□□□□ -1.03
MACF1Q9UPN3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
MACF1Q9UPN3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC8.63□□□□□ -1.03
MACF1Q9UPN3 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC8.63□□□□□ -1.03
MACF1Q9UPN3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
MACF1Q9UPN3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
MACF1Q9UPN3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
MACF1Q9UPN3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC8.63□□□□□ -1.03
MACF1Q9UPN3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
MACF1Q9UPN3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
MACF1Q9UPN3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
MACF1Q9UPN3 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC8.63□□□□□ -1.03
MACF1Q9UPN3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC8.63□□□□□ -1.03
MACF1Q9UPN3 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC8.63□□□□□ -1.03
MACF1Q9UPN3 AC120498.8-201ENST00000614275 531 ntBASIC8.63□□□□□ -1.03
MACF1Q9UPN3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
MACF1Q9UPN3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC8.63□□□□□ -1.03
MACF1Q9UPN3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC8.63□□□□□ -1.03
MACF1Q9UPN3 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC8.63□□□□□ -1.03
MACF1Q9UPN3 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
MACF1Q9UPN3 MESTP1-201ENST00000404287 994 ntBASIC8.63□□□□□ -1.03
MACF1Q9UPN3 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
MACF1Q9UPN3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC8.63□□□□□ -1.03
MACF1Q9UPN3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC8.63□□□□□ -1.03
MACF1Q9UPN3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
MACF1Q9UPN3 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC8.63□□□□□ -1.03
MACF1Q9UPN3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC8.63□□□□□ -1.03
MACF1Q9UPN3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC8.63□□□□□ -1.03
MACF1Q9UPN3 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
MACF1Q9UPN3 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC8.63□□□□□ -1.03
MACF1Q9UPN3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC8.63□□□□□ -1.03
MACF1Q9UPN3 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
MACF1Q9UPN3 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
MACF1Q9UPN3 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
MACF1Q9UPN3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC8.63□□□□□ -1.03
MACF1Q9UPN3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC8.63□□□□□ -1.03
MACF1Q9UPN3 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC8.63□□□□□ -1.03
MACF1Q9UPN3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC8.63□□□□□ -1.03
MACF1Q9UPN3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
MACF1Q9UPN3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
MACF1Q9UPN3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
MACF1Q9UPN3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
MACF1Q9UPN3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC8.62□□□□□ -1.03
MACF1Q9UPN3 AC092647.4-201ENST00000457211 535 ntBASIC8.62□□□□□ -1.03
MACF1Q9UPN3 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
MACF1Q9UPN3 AC106795.1-205ENST00000512851 1056 ntBASIC8.62□□□□□ -1.03
MACF1Q9UPN3 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC8.62□□□□□ -1.03
MACF1Q9UPN3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
MACF1Q9UPN3 AC111152.3-201ENST00000569699 673 ntBASIC8.62□□□□□ -1.03
MACF1Q9UPN3 AC100791.3-201ENST00000617619 330 ntBASIC8.62□□□□□ -1.03
MACF1Q9UPN3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC8.62□□□□□ -1.03
MACF1Q9UPN3 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
MACF1Q9UPN3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC8.62□□□□□ -1.03
MACF1Q9UPN3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC8.62□□□□□ -1.03
MACF1Q9UPN3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms