Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
LHX6Q9UPM6 MMP23A-201ENST00000234610 1017 ntBASIC19.54■□□□□ 0.72
LHX6Q9UPM6 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
LHX6Q9UPM6 POM121L13P-201ENST00000422362 380 ntBASIC19.54■□□□□ 0.72
LHX6Q9UPM6 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.54■□□□□ 0.72
LHX6Q9UPM6 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LHX6Q9UPM6 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LHX6Q9UPM6 EEF1DP3-203ENST00000566025 782 ntBASIC19.54■□□□□ 0.72
LHX6Q9UPM6 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
LHX6Q9UPM6 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LHX6Q9UPM6 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LHX6Q9UPM6 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LHX6Q9UPM6 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LHX6Q9UPM6 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LHX6Q9UPM6 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LHX6Q9UPM6 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LHX6Q9UPM6 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.53■□□□□ 0.72
LHX6Q9UPM6 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LHX6Q9UPM6 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.53■□□□□ 0.72
LHX6Q9UPM6 AC005521.1-201ENST00000393351 872 ntBASIC19.53■□□□□ 0.72
LHX6Q9UPM6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.53■□□□□ 0.72
LHX6Q9UPM6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.53■□□□□ 0.72
LHX6Q9UPM6 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.53■□□□□ 0.72
LHX6Q9UPM6 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.53■□□□□ 0.72
LHX6Q9UPM6 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.53■□□□□ 0.72
LHX6Q9UPM6 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
LHX6Q9UPM6 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.53■□□□□ 0.72
LHX6Q9UPM6 AC087388.1-201ENST00000571370 1112 ntBASIC19.53■□□□□ 0.72
LHX6Q9UPM6 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.53■□□□□ 0.72
LHX6Q9UPM6 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
LHX6Q9UPM6 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LHX6Q9UPM6 AC053503.5-201ENST00000601508 636 ntBASIC19.53■□□□□ 0.72
LHX6Q9UPM6 LINC01960-201ENST00000563759 1884 ntBASIC19.53■□□□□ 0.72
LHX6Q9UPM6 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LHX6Q9UPM6 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LHX6Q9UPM6 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
LHX6Q9UPM6 AP004607.7-201ENST00000527152 1677 ntBASIC19.52■□□□□ 0.72
LHX6Q9UPM6 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
LHX6Q9UPM6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
LHX6Q9UPM6 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LHX6Q9UPM6 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LHX6Q9UPM6 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
LHX6Q9UPM6 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.52■□□□□ 0.72
LHX6Q9UPM6 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LHX6Q9UPM6 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.52■□□□□ 0.72
LHX6Q9UPM6 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.52■□□□□ 0.72
LHX6Q9UPM6 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.52■□□□□ 0.72
LHX6Q9UPM6 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.52■□□□□ 0.72
LHX6Q9UPM6 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LHX6Q9UPM6 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LHX6Q9UPM6 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LHX6Q9UPM6 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LHX6Q9UPM6 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LHX6Q9UPM6 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.51■□□□□ 0.71
LHX6Q9UPM6 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LHX6Q9UPM6 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LHX6Q9UPM6 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.51■□□□□ 0.71
LHX6Q9UPM6 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
LHX6Q9UPM6 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
LHX6Q9UPM6 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.51■□□□□ 0.71
LHX6Q9UPM6 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.51■□□□□ 0.71
LHX6Q9UPM6 NTF6B-201ENST00000591913 560 ntBASIC19.51■□□□□ 0.71
LHX6Q9UPM6 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LHX6Q9UPM6 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.51■□□□□ 0.71
LHX6Q9UPM6 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.51■□□□□ 0.71
LHX6Q9UPM6 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.51■□□□□ 0.71
LHX6Q9UPM6 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.51■□□□□ 0.71
LHX6Q9UPM6 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LHX6Q9UPM6 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LHX6Q9UPM6 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.51■□□□□ 0.71
LHX6Q9UPM6 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LHX6Q9UPM6 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.51■□□□□ 0.71
LHX6Q9UPM6 AC092068.2-201ENST00000590491 1708 ntBASIC19.51■□□□□ 0.71
LHX6Q9UPM6 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LHX6Q9UPM6 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
LHX6Q9UPM6 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LHX6Q9UPM6 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.5■□□□□ 0.71
LHX6Q9UPM6 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
LHX6Q9UPM6 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LHX6Q9UPM6 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LHX6Q9UPM6 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LHX6Q9UPM6 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
LHX6Q9UPM6 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.5■□□□□ 0.71
LHX6Q9UPM6 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
LHX6Q9UPM6 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.5■□□□□ 0.71
LHX6Q9UPM6 AC008175.2-201ENST00000612840 297 ntBASIC19.5■□□□□ 0.71
LHX6Q9UPM6 MIR6786-201ENST00000616843 113 ntBASIC19.5■□□□□ 0.71
LHX6Q9UPM6 AP001002.2-201ENST00000625137 386 ntBASIC19.5■□□□□ 0.71
LHX6Q9UPM6 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LHX6Q9UPM6 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.5■□□□□ 0.71
LHX6Q9UPM6 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.5■□□□□ 0.71
LHX6Q9UPM6 RBM17P2-201ENST00000616397 1405 ntBASIC19.5■□□□□ 0.71
LHX6Q9UPM6 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LHX6Q9UPM6 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LHX6Q9UPM6 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LHX6Q9UPM6 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LHX6Q9UPM6 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
LHX6Q9UPM6 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LHX6Q9UPM6 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
LHX6Q9UPM6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms