Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HACD3Q9P035 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
HACD3Q9P035 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HACD3Q9P035 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
HACD3Q9P035 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HACD3Q9P035 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
HACD3Q9P035 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
HACD3Q9P035 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.87■□□□□ 0.93
HACD3Q9P035 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HACD3Q9P035 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HACD3Q9P035 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HACD3Q9P035 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
HACD3Q9P035 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.87■□□□□ 0.93
HACD3Q9P035 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HACD3Q9P035 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.87■□□□□ 0.93
HACD3Q9P035 RARRES2P11-201ENST00000635158 484 ntBASIC20.87■□□□□ 0.93
HACD3Q9P035 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.87■□□□□ 0.93
HACD3Q9P035 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.87■□□□□ 0.93
HACD3Q9P035 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HACD3Q9P035 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HACD3Q9P035 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HACD3Q9P035 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.87■□□□□ 0.93
HACD3Q9P035 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HACD3Q9P035 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
HACD3Q9P035 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.86■□□□□ 0.93
HACD3Q9P035 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HACD3Q9P035 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.86■□□□□ 0.93
HACD3Q9P035 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.86■□□□□ 0.93
HACD3Q9P035 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.86■□□□□ 0.93
HACD3Q9P035 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
HACD3Q9P035 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.86■□□□□ 0.93
HACD3Q9P035 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HACD3Q9P035 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HACD3Q9P035 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HACD3Q9P035 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HACD3Q9P035 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.86■□□□□ 0.93
HACD3Q9P035 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HACD3Q9P035 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
HACD3Q9P035 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HACD3Q9P035 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HACD3Q9P035 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.85■□□□□ 0.93
HACD3Q9P035 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HACD3Q9P035 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
HACD3Q9P035 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HACD3Q9P035 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HACD3Q9P035 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
HACD3Q9P035 AF106564.1-201ENST00000607058 2553 ntBASIC20.85■□□□□ 0.93
HACD3Q9P035 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HACD3Q9P035 AC006015.1-201ENST00000429970 570 ntBASIC20.85■□□□□ 0.93
HACD3Q9P035 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.85■□□□□ 0.93
HACD3Q9P035 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HACD3Q9P035 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.85■□□□□ 0.93
HACD3Q9P035 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.85■□□□□ 0.93
HACD3Q9P035 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.85■□□□□ 0.93
HACD3Q9P035 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.85■□□□□ 0.93
HACD3Q9P035 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.85■□□□□ 0.93
HACD3Q9P035 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HACD3Q9P035 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HACD3Q9P035 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.85■□□□□ 0.93
HACD3Q9P035 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
HACD3Q9P035 RBM17P2-201ENST00000616397 1405 ntBASIC20.85■□□□□ 0.93
HACD3Q9P035 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HACD3Q9P035 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.84■□□□□ 0.93
HACD3Q9P035 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
HACD3Q9P035 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HACD3Q9P035 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HACD3Q9P035 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HACD3Q9P035 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.84■□□□□ 0.93
HACD3Q9P035 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.84■□□□□ 0.93
HACD3Q9P035 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.84■□□□□ 0.93
HACD3Q9P035 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.84■□□□□ 0.93
HACD3Q9P035 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.84■□□□□ 0.93
HACD3Q9P035 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HACD3Q9P035 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HACD3Q9P035 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HACD3Q9P035 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HACD3Q9P035 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
HACD3Q9P035 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HACD3Q9P035 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
HACD3Q9P035 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.83■□□□□ 0.93
HACD3Q9P035 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.83■□□□□ 0.93
HACD3Q9P035 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.83■□□□□ 0.93
HACD3Q9P035 AC022517.1-201ENST00000592429 346 ntBASIC20.83■□□□□ 0.93
HACD3Q9P035 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
HACD3Q9P035 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
HACD3Q9P035 AC005229.4-201ENST00000610085 2198 ntBASIC20.83■□□□□ 0.92
HACD3Q9P035 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
HACD3Q9P035 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
HACD3Q9P035 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.92
HACD3Q9P035 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.83■□□□□ 0.92
HACD3Q9P035 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HACD3Q9P035 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HACD3Q9P035 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HACD3Q9P035 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HACD3Q9P035 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
HACD3Q9P035 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HACD3Q9P035 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HACD3Q9P035 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.82■□□□□ 0.92
HACD3Q9P035 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.82■□□□□ 0.92
HACD3Q9P035 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms