Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RLIMQ9NVW2 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RLIMQ9NVW2 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RLIMQ9NVW2 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.24■□□□□ 0.67
RLIMQ9NVW2 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.24■□□□□ 0.67
RLIMQ9NVW2 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RLIMQ9NVW2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.23■□□□□ 0.67
RLIMQ9NVW2 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RLIMQ9NVW2 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RLIMQ9NVW2 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RLIMQ9NVW2 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.23■□□□□ 0.67
RLIMQ9NVW2 AC079140.4-201ENST00000507448 529 ntBASIC19.23■□□□□ 0.67
RLIMQ9NVW2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RLIMQ9NVW2 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.23■□□□□ 0.67
RLIMQ9NVW2 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.23■□□□□ 0.67
RLIMQ9NVW2 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RLIMQ9NVW2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RLIMQ9NVW2 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RLIMQ9NVW2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.23■□□□□ 0.67
RLIMQ9NVW2 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RLIMQ9NVW2 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RLIMQ9NVW2 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RLIMQ9NVW2 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RLIMQ9NVW2 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
RLIMQ9NVW2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RLIMQ9NVW2 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
RLIMQ9NVW2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RLIMQ9NVW2 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
RLIMQ9NVW2 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RLIMQ9NVW2 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.22■□□□□ 0.67
RLIMQ9NVW2 AC027612.3-201ENST00000413684 1047 ntBASIC19.22■□□□□ 0.67
RLIMQ9NVW2 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RLIMQ9NVW2 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.22■□□□□ 0.67
RLIMQ9NVW2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RLIMQ9NVW2 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.22■□□□□ 0.67
RLIMQ9NVW2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RLIMQ9NVW2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RLIMQ9NVW2 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RLIMQ9NVW2 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.22■□□□□ 0.67
RLIMQ9NVW2 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RLIMQ9NVW2 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
RLIMQ9NVW2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.22■□□□□ 0.67
RLIMQ9NVW2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.21■□□□□ 0.67
RLIMQ9NVW2 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.21■□□□□ 0.67
RLIMQ9NVW2 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RLIMQ9NVW2 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RLIMQ9NVW2 AFG3L1P-217ENST00000557444 2447 ntBASIC19.21■□□□□ 0.67
RLIMQ9NVW2 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RLIMQ9NVW2 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.21■□□□□ 0.67
RLIMQ9NVW2 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RLIMQ9NVW2 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RLIMQ9NVW2 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.21■□□□□ 0.67
RLIMQ9NVW2 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.21■□□□□ 0.67
RLIMQ9NVW2 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RLIMQ9NVW2 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RLIMQ9NVW2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.21■□□□□ 0.67
RLIMQ9NVW2 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RLIMQ9NVW2 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
RLIMQ9NVW2 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RLIMQ9NVW2 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RLIMQ9NVW2 AC027702.1-201ENST00000563810 1770 ntBASIC19.21■□□□□ 0.67
RLIMQ9NVW2 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RLIMQ9NVW2 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RLIMQ9NVW2 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RLIMQ9NVW2 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.2■□□□□ 0.66
RLIMQ9NVW2 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
RLIMQ9NVW2 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RLIMQ9NVW2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RLIMQ9NVW2 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.2■□□□□ 0.66
RLIMQ9NVW2 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RLIMQ9NVW2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RLIMQ9NVW2 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RLIMQ9NVW2 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RLIMQ9NVW2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RLIMQ9NVW2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RLIMQ9NVW2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.2■□□□□ 0.66
RLIMQ9NVW2 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.2■□□□□ 0.66
RLIMQ9NVW2 KRT87P-202ENST00000534226 1464 ntBASIC19.2■□□□□ 0.66
RLIMQ9NVW2 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RLIMQ9NVW2 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
RLIMQ9NVW2 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.2■□□□□ 0.66
RLIMQ9NVW2 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RLIMQ9NVW2 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RLIMQ9NVW2 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RLIMQ9NVW2 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RLIMQ9NVW2 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RLIMQ9NVW2 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RLIMQ9NVW2 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RLIMQ9NVW2 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.19■□□□□ 0.66
RLIMQ9NVW2 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
RLIMQ9NVW2 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RLIMQ9NVW2 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RLIMQ9NVW2 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RLIMQ9NVW2 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RLIMQ9NVW2 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.19■□□□□ 0.66
RLIMQ9NVW2 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RLIMQ9NVW2 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RLIMQ9NVW2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.19■□□□□ 0.66
RLIMQ9NVW2 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.19■□□□□ 0.66
RLIMQ9NVW2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms