Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
BLOC1S4Q9NUP1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
BLOC1S4Q9NUP1 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
BLOC1S4Q9NUP1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
BLOC1S4Q9NUP1 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
BLOC1S4Q9NUP1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
BLOC1S4Q9NUP1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC23.05■■□□□ 1.28
BLOC1S4Q9NUP1 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.05■■□□□ 1.28
BLOC1S4Q9NUP1 CNN2P6-201ENST00000439038 900 ntBASIC23.05■■□□□ 1.28
BLOC1S4Q9NUP1 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
BLOC1S4Q9NUP1 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.05■■□□□ 1.28
BLOC1S4Q9NUP1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
BLOC1S4Q9NUP1 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
BLOC1S4Q9NUP1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC23.05■■□□□ 1.28
BLOC1S4Q9NUP1 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
BLOC1S4Q9NUP1 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
BLOC1S4Q9NUP1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
BLOC1S4Q9NUP1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC23.04■■□□□ 1.28
BLOC1S4Q9NUP1 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC23.04■■□□□ 1.28
BLOC1S4Q9NUP1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
BLOC1S4Q9NUP1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
BLOC1S4Q9NUP1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC23.04■■□□□ 1.28
BLOC1S4Q9NUP1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
BLOC1S4Q9NUP1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
BLOC1S4Q9NUP1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
BLOC1S4Q9NUP1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
BLOC1S4Q9NUP1 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
BLOC1S4Q9NUP1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
BLOC1S4Q9NUP1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC23.04■■□□□ 1.28
BLOC1S4Q9NUP1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
BLOC1S4Q9NUP1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.04■■□□□ 1.28
BLOC1S4Q9NUP1 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.04■■□□□ 1.28
BLOC1S4Q9NUP1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
BLOC1S4Q9NUP1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
BLOC1S4Q9NUP1 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23.04■■□□□ 1.28
BLOC1S4Q9NUP1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
BLOC1S4Q9NUP1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC23.04■■□□□ 1.28
BLOC1S4Q9NUP1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
BLOC1S4Q9NUP1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
BLOC1S4Q9NUP1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
BLOC1S4Q9NUP1 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
BLOC1S4Q9NUP1 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC23.04■■□□□ 1.28
BLOC1S4Q9NUP1 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
BLOC1S4Q9NUP1 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
BLOC1S4Q9NUP1 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
BLOC1S4Q9NUP1 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
BLOC1S4Q9NUP1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
BLOC1S4Q9NUP1 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.03■■□□□ 1.28
BLOC1S4Q9NUP1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC23.03■■□□□ 1.28
BLOC1S4Q9NUP1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
BLOC1S4Q9NUP1 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
BLOC1S4Q9NUP1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
BLOC1S4Q9NUP1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
BLOC1S4Q9NUP1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC23.03■■□□□ 1.28
BLOC1S4Q9NUP1 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
BLOC1S4Q9NUP1 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC23.03■■□□□ 1.28
BLOC1S4Q9NUP1 AL157384.1-201ENST00000445995 2473 ntBASIC23.03■■□□□ 1.28
BLOC1S4Q9NUP1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
BLOC1S4Q9NUP1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
BLOC1S4Q9NUP1 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
BLOC1S4Q9NUP1 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
BLOC1S4Q9NUP1 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
BLOC1S4Q9NUP1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC23.02■■□□□ 1.28
BLOC1S4Q9NUP1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
BLOC1S4Q9NUP1 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC23.02■■□□□ 1.28
BLOC1S4Q9NUP1 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
BLOC1S4Q9NUP1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
BLOC1S4Q9NUP1 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC23.02■■□□□ 1.28
BLOC1S4Q9NUP1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
BLOC1S4Q9NUP1 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC23.02■■□□□ 1.28
BLOC1S4Q9NUP1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
BLOC1S4Q9NUP1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
BLOC1S4Q9NUP1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC23.02■■□□□ 1.28
BLOC1S4Q9NUP1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC23.01■■□□□ 1.27
BLOC1S4Q9NUP1 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC23.01■■□□□ 1.27
BLOC1S4Q9NUP1 AC027702.1-201ENST00000563810 1770 ntBASIC23.01■■□□□ 1.27
BLOC1S4Q9NUP1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
BLOC1S4Q9NUP1 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
BLOC1S4Q9NUP1 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
BLOC1S4Q9NUP1 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
BLOC1S4Q9NUP1 AC007225.1-201ENST00000566331 1836 ntBASIC23.01■■□□□ 1.27
BLOC1S4Q9NUP1 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
BLOC1S4Q9NUP1 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
BLOC1S4Q9NUP1 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
BLOC1S4Q9NUP1 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
BLOC1S4Q9NUP1 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
BLOC1S4Q9NUP1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
BLOC1S4Q9NUP1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.01■■□□□ 1.27
BLOC1S4Q9NUP1 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
BLOC1S4Q9NUP1 AC007322.4-201ENST00000509611 723 ntBASIC23.01■■□□□ 1.27
BLOC1S4Q9NUP1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC23.01■■□□□ 1.27
BLOC1S4Q9NUP1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC23.01■■□□□ 1.27
BLOC1S4Q9NUP1 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC23.01■■□□□ 1.27
BLOC1S4Q9NUP1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
BLOC1S4Q9NUP1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC23.01■■□□□ 1.27
BLOC1S4Q9NUP1 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
BLOC1S4Q9NUP1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
BLOC1S4Q9NUP1 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
BLOC1S4Q9NUP1 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC23■■□□□ 1.27
BLOC1S4Q9NUP1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms