Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
CLK4Q9HAZ1 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.04■□□□□ 0.8
CLK4Q9HAZ1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLK4Q9HAZ1 AC004854.2-201ENST00000608450 1441 ntBASIC20.03■□□□□ 0.8
CLK4Q9HAZ1 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLK4Q9HAZ1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.03■□□□□ 0.8
CLK4Q9HAZ1 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLK4Q9HAZ1 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLK4Q9HAZ1 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.03■□□□□ 0.8
CLK4Q9HAZ1 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLK4Q9HAZ1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CLK4Q9HAZ1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CLK4Q9HAZ1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.03■□□□□ 0.8
CLK4Q9HAZ1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLK4Q9HAZ1 KRT18P20-201ENST00000548986 1279 ntBASIC20.03■□□□□ 0.8
CLK4Q9HAZ1 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CLK4Q9HAZ1 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.03■□□□□ 0.8
CLK4Q9HAZ1 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLK4Q9HAZ1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CLK4Q9HAZ1 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLK4Q9HAZ1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CLK4Q9HAZ1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLK4Q9HAZ1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CLK4Q9HAZ1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.02■□□□□ 0.8
CLK4Q9HAZ1 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.02■□□□□ 0.8
CLK4Q9HAZ1 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.02■□□□□ 0.8
CLK4Q9HAZ1 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.02■□□□□ 0.8
CLK4Q9HAZ1 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLK4Q9HAZ1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLK4Q9HAZ1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLK4Q9HAZ1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.02■□□□□ 0.8
CLK4Q9HAZ1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLK4Q9HAZ1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.02■□□□□ 0.8
CLK4Q9HAZ1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLK4Q9HAZ1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLK4Q9HAZ1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLK4Q9HAZ1 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CLK4Q9HAZ1 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CLK4Q9HAZ1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CLK4Q9HAZ1 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CLK4Q9HAZ1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CLK4Q9HAZ1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLK4Q9HAZ1 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.01■□□□□ 0.79
CLK4Q9HAZ1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLK4Q9HAZ1 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLK4Q9HAZ1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.01■□□□□ 0.79
CLK4Q9HAZ1 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLK4Q9HAZ1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.01■□□□□ 0.79
CLK4Q9HAZ1 AC010141.2-201ENST00000452426 721 ntBASIC20.01■□□□□ 0.79
CLK4Q9HAZ1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.01■□□□□ 0.79
CLK4Q9HAZ1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLK4Q9HAZ1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.01■□□□□ 0.79
CLK4Q9HAZ1 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLK4Q9HAZ1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLK4Q9HAZ1 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLK4Q9HAZ1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CLK4Q9HAZ1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLK4Q9HAZ1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLK4Q9HAZ1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CLK4Q9HAZ1 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CLK4Q9HAZ1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLK4Q9HAZ1 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CLK4Q9HAZ1 POU5F1P4-201ENST00000413175 1085 ntBASIC20■□□□□ 0.79
CLK4Q9HAZ1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20■□□□□ 0.79
CLK4Q9HAZ1 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20■□□□□ 0.79
CLK4Q9HAZ1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20■□□□□ 0.79
CLK4Q9HAZ1 AC104187.1-201ENST00000607510 612 ntBASIC20■□□□□ 0.79
CLK4Q9HAZ1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20■□□□□ 0.79
CLK4Q9HAZ1 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20■□□□□ 0.79
CLK4Q9HAZ1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLK4Q9HAZ1 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20■□□□□ 0.79
CLK4Q9HAZ1 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLK4Q9HAZ1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLK4Q9HAZ1 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLK4Q9HAZ1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.99■□□□□ 0.79
CLK4Q9HAZ1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLK4Q9HAZ1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLK4Q9HAZ1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLK4Q9HAZ1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.99■□□□□ 0.79
CLK4Q9HAZ1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLK4Q9HAZ1 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.99■□□□□ 0.79
CLK4Q9HAZ1 KRT18P11-201ENST00000435214 1283 ntBASIC19.99■□□□□ 0.79
CLK4Q9HAZ1 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.99■□□□□ 0.79
CLK4Q9HAZ1 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.99■□□□□ 0.79
CLK4Q9HAZ1 AP001160.3-201ENST00000601484 763 ntBASIC19.99■□□□□ 0.79
CLK4Q9HAZ1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLK4Q9HAZ1 AC008175.2-201ENST00000612840 297 ntBASIC19.99■□□□□ 0.79
CLK4Q9HAZ1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLK4Q9HAZ1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CLK4Q9HAZ1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.99■□□□□ 0.79
CLK4Q9HAZ1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.99■□□□□ 0.79
CLK4Q9HAZ1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.99■□□□□ 0.79
CLK4Q9HAZ1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLK4Q9HAZ1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.99■□□□□ 0.79
CLK4Q9HAZ1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.99■□□□□ 0.79
CLK4Q9HAZ1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLK4Q9HAZ1 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLK4Q9HAZ1 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLK4Q9HAZ1 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLK4Q9HAZ1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms