Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NANOGQ9H9S0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NANOGQ9H9S0 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NANOGQ9H9S0 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NANOGQ9H9S0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NANOGQ9H9S0 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.6■□□□□ 0.73
NANOGQ9H9S0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NANOGQ9H9S0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
NANOGQ9H9S0 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.6■□□□□ 0.73
NANOGQ9H9S0 AC005224.4-201ENST00000583262 1652 ntBASIC19.59■□□□□ 0.73
NANOGQ9H9S0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.59■□□□□ 0.73
NANOGQ9H9S0 AC099778.1-201ENST00000568593 1911 ntBASIC19.59■□□□□ 0.73
NANOGQ9H9S0 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NANOGQ9H9S0 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
NANOGQ9H9S0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NANOGQ9H9S0 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.59■□□□□ 0.73
NANOGQ9H9S0 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NANOGQ9H9S0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NANOGQ9H9S0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NANOGQ9H9S0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.59■□□□□ 0.73
NANOGQ9H9S0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NANOGQ9H9S0 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NANOGQ9H9S0 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
NANOGQ9H9S0 AC011484.1-201ENST00000377652 1995 ntBASIC19.59■□□□□ 0.73
NANOGQ9H9S0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NANOGQ9H9S0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.59■□□□□ 0.73
NANOGQ9H9S0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NANOGQ9H9S0 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
NANOGQ9H9S0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NANOGQ9H9S0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
NANOGQ9H9S0 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NANOGQ9H9S0 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NANOGQ9H9S0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NANOGQ9H9S0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NANOGQ9H9S0 MIR4767-201ENST00000582827 78 ntBASIC19.58■□□□□ 0.72
NANOGQ9H9S0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
NANOGQ9H9S0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.58■□□□□ 0.72
NANOGQ9H9S0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.57■□□□□ 0.72
NANOGQ9H9S0 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NANOGQ9H9S0 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NANOGQ9H9S0 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
NANOGQ9H9S0 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
NANOGQ9H9S0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NANOGQ9H9S0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NANOGQ9H9S0 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NANOGQ9H9S0 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NANOGQ9H9S0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NANOGQ9H9S0 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NANOGQ9H9S0 IGHV3-19-201ENST00000521488 291 ntBASIC19.57■□□□□ 0.72
NANOGQ9H9S0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.57■□□□□ 0.72
NANOGQ9H9S0 AC126544.1-201ENST00000580842 1059 ntBASIC19.57■□□□□ 0.72
NANOGQ9H9S0 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.57■□□□□ 0.72
NANOGQ9H9S0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
NANOGQ9H9S0 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NANOGQ9H9S0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NANOGQ9H9S0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.57■□□□□ 0.72
NANOGQ9H9S0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NANOGQ9H9S0 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.56■□□□□ 0.72
NANOGQ9H9S0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
NANOGQ9H9S0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NANOGQ9H9S0 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NANOGQ9H9S0 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
NANOGQ9H9S0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NANOGQ9H9S0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NANOGQ9H9S0 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.56■□□□□ 0.72
NANOGQ9H9S0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NANOGQ9H9S0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NANOGQ9H9S0 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.56■□□□□ 0.72
NANOGQ9H9S0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.56■□□□□ 0.72
NANOGQ9H9S0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NANOGQ9H9S0 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
NANOGQ9H9S0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
NANOGQ9H9S0 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
NANOGQ9H9S0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NANOGQ9H9S0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NANOGQ9H9S0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NANOGQ9H9S0 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.55■□□□□ 0.72
NANOGQ9H9S0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
NANOGQ9H9S0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NANOGQ9H9S0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
NANOGQ9H9S0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NANOGQ9H9S0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NANOGQ9H9S0 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NANOGQ9H9S0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NANOGQ9H9S0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.55■□□□□ 0.72
NANOGQ9H9S0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
NANOGQ9H9S0 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.55■□□□□ 0.72
NANOGQ9H9S0 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.55■□□□□ 0.72
NANOGQ9H9S0 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NANOGQ9H9S0 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
NANOGQ9H9S0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NANOGQ9H9S0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NANOGQ9H9S0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.54■□□□□ 0.72
NANOGQ9H9S0 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.54■□□□□ 0.72
NANOGQ9H9S0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NANOGQ9H9S0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
NANOGQ9H9S0 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NANOGQ9H9S0 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
NANOGQ9H9S0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.54■□□□□ 0.72
NANOGQ9H9S0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms