Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VCX3BQ9H321 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
VCX3BQ9H321 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VCX3BQ9H321 AC120024.1-201ENST00000562672 995 ntBASIC19.69■□□□□ 0.74
VCX3BQ9H321 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.69■□□□□ 0.74
VCX3BQ9H321 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VCX3BQ9H321 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.69■□□□□ 0.74
VCX3BQ9H321 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
VCX3BQ9H321 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VCX3BQ9H321 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VCX3BQ9H321 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VCX3BQ9H321 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
VCX3BQ9H321 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VCX3BQ9H321 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.68■□□□□ 0.74
VCX3BQ9H321 AC099778.1-201ENST00000568593 1911 ntBASIC19.68■□□□□ 0.74
VCX3BQ9H321 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
VCX3BQ9H321 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.68■□□□□ 0.74
VCX3BQ9H321 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VCX3BQ9H321 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VCX3BQ9H321 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.68■□□□□ 0.74
VCX3BQ9H321 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VCX3BQ9H321 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VCX3BQ9H321 AP000974.1-201ENST00000623909 2387 ntBASIC19.68■□□□□ 0.74
VCX3BQ9H321 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
VCX3BQ9H321 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VCX3BQ9H321 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.68■□□□□ 0.74
VCX3BQ9H321 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
VCX3BQ9H321 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VCX3BQ9H321 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VCX3BQ9H321 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.68■□□□□ 0.74
VCX3BQ9H321 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VCX3BQ9H321 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.68■□□□□ 0.74
VCX3BQ9H321 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VCX3BQ9H321 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VCX3BQ9H321 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
VCX3BQ9H321 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
VCX3BQ9H321 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
VCX3BQ9H321 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VCX3BQ9H321 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.67■□□□□ 0.74
VCX3BQ9H321 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VCX3BQ9H321 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VCX3BQ9H321 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.67■□□□□ 0.74
VCX3BQ9H321 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.67■□□□□ 0.74
VCX3BQ9H321 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.67■□□□□ 0.74
VCX3BQ9H321 MIR4281-201ENST00000580852 62 ntBASIC19.67■□□□□ 0.74
VCX3BQ9H321 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
VCX3BQ9H321 AL512408.1-201ENST00000569378 2000 ntBASIC19.67■□□□□ 0.74
VCX3BQ9H321 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
VCX3BQ9H321 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VCX3BQ9H321 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.67■□□□□ 0.74
VCX3BQ9H321 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VCX3BQ9H321 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.67■□□□□ 0.74
VCX3BQ9H321 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
VCX3BQ9H321 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.66■□□□□ 0.74
VCX3BQ9H321 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VCX3BQ9H321 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VCX3BQ9H321 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VCX3BQ9H321 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
VCX3BQ9H321 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VCX3BQ9H321 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VCX3BQ9H321 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.66■□□□□ 0.74
VCX3BQ9H321 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
VCX3BQ9H321 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VCX3BQ9H321 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VCX3BQ9H321 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VCX3BQ9H321 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
VCX3BQ9H321 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VCX3BQ9H321 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VCX3BQ9H321 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.66■□□□□ 0.74
VCX3BQ9H321 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VCX3BQ9H321 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VCX3BQ9H321 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VCX3BQ9H321 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.65■□□□□ 0.74
VCX3BQ9H321 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.65■□□□□ 0.74
VCX3BQ9H321 AC121338.2-201ENST00000622535 1744 ntBASIC19.65■□□□□ 0.74
VCX3BQ9H321 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VCX3BQ9H321 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.65■□□□□ 0.74
VCX3BQ9H321 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VCX3BQ9H321 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VCX3BQ9H321 AC019171.1-201ENST00000601251 1056 ntBASIC19.65■□□□□ 0.74
VCX3BQ9H321 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VCX3BQ9H321 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.65■□□□□ 0.74
VCX3BQ9H321 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VCX3BQ9H321 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VCX3BQ9H321 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
VCX3BQ9H321 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
VCX3BQ9H321 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
VCX3BQ9H321 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VCX3BQ9H321 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
VCX3BQ9H321 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
VCX3BQ9H321 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VCX3BQ9H321 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VCX3BQ9H321 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VCX3BQ9H321 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VCX3BQ9H321 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.64■□□□□ 0.74
VCX3BQ9H321 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
VCX3BQ9H321 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
VCX3BQ9H321 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
VCX3BQ9H321 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
VCX3BQ9H321 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms