Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.43■□□□□ 0.38
ALX4Q9H161 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
ALX4Q9H161 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ALX4Q9H161 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
ALX4Q9H161 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
ALX4Q9H161 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
ALX4Q9H161 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ALX4Q9H161 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.43■□□□□ 0.38
ALX4Q9H161 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
ALX4Q9H161 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ALX4Q9H161 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ALX4Q9H161 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.42■□□□□ 0.38
ALX4Q9H161 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ALX4Q9H161 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ALX4Q9H161 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
ALX4Q9H161 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ALX4Q9H161 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
ALX4Q9H161 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ALX4Q9H161 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.42■□□□□ 0.38
ALX4Q9H161 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ALX4Q9H161 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.42■□□□□ 0.38
ALX4Q9H161 AC099791.2-201ENST00000605725 427 ntBASIC17.42■□□□□ 0.38
ALX4Q9H161 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.42■□□□□ 0.38
ALX4Q9H161 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ALX4Q9H161 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ALX4Q9H161 AC116562.4-201ENST00000641316 2276 ntBASIC17.42■□□□□ 0.38
ALX4Q9H161 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.42■□□□□ 0.38
ALX4Q9H161 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ALX4Q9H161 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ALX4Q9H161 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ALX4Q9H161 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ALX4Q9H161 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
ALX4Q9H161 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ALX4Q9H161 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ALX4Q9H161 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.41■□□□□ 0.38
ALX4Q9H161 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
ALX4Q9H161 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.41■□□□□ 0.38
ALX4Q9H161 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ALX4Q9H161 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ALX4Q9H161 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ALX4Q9H161 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ALX4Q9H161 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.41■□□□□ 0.38
ALX4Q9H161 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ALX4Q9H161 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ALX4Q9H161 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ALX4Q9H161 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ALX4Q9H161 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.41■□□□□ 0.38
ALX4Q9H161 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ALX4Q9H161 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ALX4Q9H161 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ALX4Q9H161 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ALX4Q9H161 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
ALX4Q9H161 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ALX4Q9H161 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ALX4Q9H161 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ALX4Q9H161 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ALX4Q9H161 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALX4Q9H161 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ALX4Q9H161 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.4■□□□□ 0.38
ALX4Q9H161 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALX4Q9H161 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ALX4Q9H161 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
ALX4Q9H161 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALX4Q9H161 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALX4Q9H161 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.4■□□□□ 0.38
ALX4Q9H161 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.4■□□□□ 0.38
ALX4Q9H161 AC110285.6-201ENST00000617652 491 ntBASIC17.4■□□□□ 0.38
ALX4Q9H161 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ALX4Q9H161 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.4■□□□□ 0.38
ALX4Q9H161 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ALX4Q9H161 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
ALX4Q9H161 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.4■□□□□ 0.38
ALX4Q9H161 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.38
ALX4Q9H161 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALX4Q9H161 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALX4Q9H161 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ALX4Q9H161 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.39■□□□□ 0.37
ALX4Q9H161 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.39■□□□□ 0.37
ALX4Q9H161 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ALX4Q9H161 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ALX4Q9H161 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
ALX4Q9H161 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.39■□□□□ 0.37
ALX4Q9H161 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ALX4Q9H161 UNC93B3-201ENST00000308076 687 ntBASIC17.39■□□□□ 0.37
ALX4Q9H161 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALX4Q9H161 AC006455.2-201ENST00000429931 906 ntBASIC17.39■□□□□ 0.37
ALX4Q9H161 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.39■□□□□ 0.37
ALX4Q9H161 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALX4Q9H161 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALX4Q9H161 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
ALX4Q9H161 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALX4Q9H161 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
ALX4Q9H161 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.39■□□□□ 0.37
ALX4Q9H161 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALX4Q9H161 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALX4Q9H161 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALX4Q9H161 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALX4Q9H161 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALX4Q9H161 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ALX4Q9H161 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms