Protein–RNA interactions for Protein: Q9H089

LSG1, Large subunit GTPase 1 homolog, humanhuman

Known RBP Predictions only

Length 658 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1Q9H089 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
LSG1Q9H089 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
LSG1Q9H089 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
LSG1Q9H089 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC24.75■■□□□ 1.55
LSG1Q9H089 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
LSG1Q9H089 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
LSG1Q9H089 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC24.75■■□□□ 1.55
LSG1Q9H089 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC24.75■■□□□ 1.55
LSG1Q9H089 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
LSG1Q9H089 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
LSG1Q9H089 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
LSG1Q9H089 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
LSG1Q9H089 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC24.75■■□□□ 1.55
LSG1Q9H089 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
LSG1Q9H089 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
LSG1Q9H089 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
LSG1Q9H089 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
LSG1Q9H089 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.74■■□□□ 1.55
LSG1Q9H089 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC24.74■■□□□ 1.55
LSG1Q9H089 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
LSG1Q9H089 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC24.74■■□□□ 1.55
LSG1Q9H089 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC24.74■■□□□ 1.55
LSG1Q9H089 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC24.74■■□□□ 1.55
LSG1Q9H089 MYCNOS-205ENST00000641950 531 ntBASIC24.74■■□□□ 1.55
LSG1Q9H089 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
LSG1Q9H089 STAC-204ENST00000457375 1366 ntTSL 2 BASIC24.74■■□□□ 1.55
LSG1Q9H089 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
LSG1Q9H089 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC24.74■■□□□ 1.55
LSG1Q9H089 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC24.74■■□□□ 1.55
LSG1Q9H089 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
LSG1Q9H089 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
LSG1Q9H089 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
LSG1Q9H089 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
LSG1Q9H089 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC24.73■■□□□ 1.55
LSG1Q9H089 AC073130.3-201ENST00000624389 2278 ntBASIC24.73■■□□□ 1.55
LSG1Q9H089 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
LSG1Q9H089 FP700111.2-201ENST00000619190 1892 ntBASIC24.73■■□□□ 1.55
LSG1Q9H089 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC24.73■■□□□ 1.55
LSG1Q9H089 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC24.73■■□□□ 1.55
LSG1Q9H089 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC24.73■■□□□ 1.55
LSG1Q9H089 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC24.73■■□□□ 1.55
LSG1Q9H089 STX7-201ENST00000367937 1090 ntTSL 5 BASIC24.73■■□□□ 1.55
LSG1Q9H089 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
LSG1Q9H089 UQCRFS1P1-201ENST00000435169 820 ntBASIC24.73■■□□□ 1.55
LSG1Q9H089 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC24.73■■□□□ 1.55
LSG1Q9H089 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC24.73■■□□□ 1.55
LSG1Q9H089 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
LSG1Q9H089 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC24.73■■□□□ 1.55
LSG1Q9H089 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
LSG1Q9H089 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
LSG1Q9H089 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC24.72■■□□□ 1.55
LSG1Q9H089 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
LSG1Q9H089 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
LSG1Q9H089 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
LSG1Q9H089 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
LSG1Q9H089 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC24.72■■□□□ 1.55
LSG1Q9H089 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC24.72■■□□□ 1.55
LSG1Q9H089 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC24.72■■□□□ 1.55
LSG1Q9H089 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC24.72■■□□□ 1.55
LSG1Q9H089 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
LSG1Q9H089 GABARAPL3-202ENST00000624044 1851 ntBASIC24.72■■□□□ 1.55
LSG1Q9H089 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
LSG1Q9H089 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC24.72■■□□□ 1.55
LSG1Q9H089 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
LSG1Q9H089 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
LSG1Q9H089 AL121603.2-201ENST00000557373 2117 ntBASIC24.71■■□□□ 1.55
LSG1Q9H089 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC24.71■■□□□ 1.55
LSG1Q9H089 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
LSG1Q9H089 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
LSG1Q9H089 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
LSG1Q9H089 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC24.71■■□□□ 1.55
LSG1Q9H089 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
LSG1Q9H089 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
LSG1Q9H089 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC24.71■■□□□ 1.55
LSG1Q9H089 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC24.71■■□□□ 1.55
LSG1Q9H089 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
LSG1Q9H089 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
LSG1Q9H089 DBI-210ENST00000542275 757 ntTSL 5 BASIC24.71■■□□□ 1.55
LSG1Q9H089 AC116050.2-201ENST00000612102 1779 ntBASIC24.71■■□□□ 1.55
LSG1Q9H089 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
LSG1Q9H089 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
LSG1Q9H089 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC24.71■■□□□ 1.55
LSG1Q9H089 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC24.71■■□□□ 1.55
LSG1Q9H089 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC24.71■■□□□ 1.55
LSG1Q9H089 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
LSG1Q9H089 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
LSG1Q9H089 PARP1-202ENST00000366792 553 ntTSL 3 BASIC24.7■■□□□ 1.54
LSG1Q9H089 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
LSG1Q9H089 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC24.7■■□□□ 1.54
LSG1Q9H089 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
LSG1Q9H089 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC24.7■■□□□ 1.54
LSG1Q9H089 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
LSG1Q9H089 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
LSG1Q9H089 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC24.7■■□□□ 1.54
LSG1Q9H089 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
LSG1Q9H089 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
LSG1Q9H089 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC24.7■■□□□ 1.54
LSG1Q9H089 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
LSG1Q9H089 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC24.7■■□□□ 1.54
LSG1Q9H089 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms