Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 AC073314.1-201ENST00000568729 2216 ntBASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 KRT18P24-201ENST00000344739 1156 ntBASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 MIR639-201ENST00000384974 98 ntBASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 THA1P-201ENST00000590384 1145 ntBASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 AC026471.6-201ENST00000622954 1905 ntBASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 OR7E47P-201ENST00000546390 1422 ntBASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 AL020996.1-203ENST00000536896 2307 ntBASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 AC005703.6-201ENST00000623265 1329 ntBASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 AC079089.2-201ENST00000531211 1277 ntBASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 MIR4281-201ENST00000580852 62 ntBASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC5.57□□□□□ -1.52
LCE3DQ9BYE3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms