Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NICN1Q9BSH3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NICN1Q9BSH3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NICN1Q9BSH3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NICN1Q9BSH3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
NICN1Q9BSH3 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NICN1Q9BSH3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NICN1Q9BSH3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NICN1Q9BSH3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.71■□□□□ 0.43
NICN1Q9BSH3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
NICN1Q9BSH3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
NICN1Q9BSH3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NICN1Q9BSH3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NICN1Q9BSH3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.71■□□□□ 0.43
NICN1Q9BSH3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NICN1Q9BSH3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NICN1Q9BSH3 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NICN1Q9BSH3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
NICN1Q9BSH3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NICN1Q9BSH3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.71■□□□□ 0.43
NICN1Q9BSH3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
NICN1Q9BSH3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.71■□□□□ 0.42
NICN1Q9BSH3 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NICN1Q9BSH3 AC020907.5-201ENST00000624372 1936 ntBASIC17.7■□□□□ 0.42
NICN1Q9BSH3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NICN1Q9BSH3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NICN1Q9BSH3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
NICN1Q9BSH3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.7■□□□□ 0.42
NICN1Q9BSH3 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NICN1Q9BSH3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
NICN1Q9BSH3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NICN1Q9BSH3 AC009237.3-201ENST00000393279 1427 ntBASIC17.7■□□□□ 0.42
NICN1Q9BSH3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
NICN1Q9BSH3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
NICN1Q9BSH3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
NICN1Q9BSH3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NICN1Q9BSH3 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.69■□□□□ 0.42
NICN1Q9BSH3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
NICN1Q9BSH3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
NICN1Q9BSH3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.69■□□□□ 0.42
NICN1Q9BSH3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
NICN1Q9BSH3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NICN1Q9BSH3 AL136116.3-201ENST00000402907 1138 ntBASIC17.69■□□□□ 0.42
NICN1Q9BSH3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NICN1Q9BSH3 AC126544.1-201ENST00000580842 1059 ntBASIC17.69■□□□□ 0.42
NICN1Q9BSH3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.69■□□□□ 0.42
NICN1Q9BSH3 AC233992.3-201ENST00000607491 485 ntBASIC17.69■□□□□ 0.42
NICN1Q9BSH3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.69■□□□□ 0.42
NICN1Q9BSH3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.69■□□□□ 0.42
NICN1Q9BSH3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NICN1Q9BSH3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
NICN1Q9BSH3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NICN1Q9BSH3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NICN1Q9BSH3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NICN1Q9BSH3 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NICN1Q9BSH3 AC112907.3-201ENST00000577781 2400 ntBASIC17.69■□□□□ 0.42
NICN1Q9BSH3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.69■□□□□ 0.42
NICN1Q9BSH3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NICN1Q9BSH3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NICN1Q9BSH3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NICN1Q9BSH3 UNC93B3-201ENST00000308076 687 ntBASIC17.68■□□□□ 0.42
NICN1Q9BSH3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
NICN1Q9BSH3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NICN1Q9BSH3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NICN1Q9BSH3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NICN1Q9BSH3 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.68■□□□□ 0.42
NICN1Q9BSH3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
NICN1Q9BSH3 IGHV3-19-201ENST00000521488 291 ntBASIC17.68■□□□□ 0.42
NICN1Q9BSH3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.68■□□□□ 0.42
NICN1Q9BSH3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NICN1Q9BSH3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.68■□□□□ 0.42
NICN1Q9BSH3 FP700111.2-201ENST00000619190 1892 ntBASIC17.68■□□□□ 0.42
NICN1Q9BSH3 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.68■□□□□ 0.42
NICN1Q9BSH3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NICN1Q9BSH3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NICN1Q9BSH3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NICN1Q9BSH3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.68■□□□□ 0.42
NICN1Q9BSH3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
NICN1Q9BSH3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NICN1Q9BSH3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.68■□□□□ 0.42
NICN1Q9BSH3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.67■□□□□ 0.42
NICN1Q9BSH3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.67■□□□□ 0.42
NICN1Q9BSH3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NICN1Q9BSH3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NICN1Q9BSH3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NICN1Q9BSH3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NICN1Q9BSH3 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
NICN1Q9BSH3 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.67■□□□□ 0.42
NICN1Q9BSH3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.67■□□□□ 0.42
NICN1Q9BSH3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NICN1Q9BSH3 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NICN1Q9BSH3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NICN1Q9BSH3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NICN1Q9BSH3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NICN1Q9BSH3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NICN1Q9BSH3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.67■□□□□ 0.42
NICN1Q9BSH3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.67■□□□□ 0.42
NICN1Q9BSH3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NICN1Q9BSH3 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.67■□□□□ 0.42
NICN1Q9BSH3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms