Protein–RNA interactions for Protein: Q9BQ39

DDX50, ATP-dependent RNA helicase DDX50, humanhuman

Known RBP Predictions only

Length 737 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX50Q9BQ39 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
DDX50Q9BQ39 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
DDX50Q9BQ39 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.53■■□□□ 1.04
DDX50Q9BQ39 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.53■■□□□ 1.04
DDX50Q9BQ39 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
DDX50Q9BQ39 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
DDX50Q9BQ39 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
DDX50Q9BQ39 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX50Q9BQ39 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
DDX50Q9BQ39 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.52■■□□□ 1.04
DDX50Q9BQ39 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
DDX50Q9BQ39 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
DDX50Q9BQ39 AC133552.2-202ENST00000575694 574 ntBASIC21.52■■□□□ 1.04
DDX50Q9BQ39 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.52■■□□□ 1.04
DDX50Q9BQ39 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.52■■□□□ 1.04
DDX50Q9BQ39 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
DDX50Q9BQ39 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
DDX50Q9BQ39 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
DDX50Q9BQ39 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
DDX50Q9BQ39 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
DDX50Q9BQ39 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX50Q9BQ39 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX50Q9BQ39 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
DDX50Q9BQ39 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
DDX50Q9BQ39 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
DDX50Q9BQ39 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.51■■□□□ 1.03
DDX50Q9BQ39 CDV3P1-201ENST00000471403 739 ntBASIC21.51■■□□□ 1.03
DDX50Q9BQ39 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
DDX50Q9BQ39 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
DDX50Q9BQ39 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.51■■□□□ 1.03
DDX50Q9BQ39 OR10C1-204ENST00000622521 1039 ntBASIC21.51■■□□□ 1.03
DDX50Q9BQ39 AC073130.3-201ENST00000624389 2278 ntBASIC21.51■■□□□ 1.03
DDX50Q9BQ39 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.51■■□□□ 1.03
DDX50Q9BQ39 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX50Q9BQ39 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX50Q9BQ39 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX50Q9BQ39 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
DDX50Q9BQ39 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.51■■□□□ 1.03
DDX50Q9BQ39 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
DDX50Q9BQ39 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.51■■□□□ 1.03
DDX50Q9BQ39 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.51■■□□□ 1.03
DDX50Q9BQ39 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX50Q9BQ39 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.51■■□□□ 1.03
DDX50Q9BQ39 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
DDX50Q9BQ39 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DDX50Q9BQ39 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
DDX50Q9BQ39 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
DDX50Q9BQ39 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
DDX50Q9BQ39 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DDX50Q9BQ39 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DDX50Q9BQ39 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.5■■□□□ 1.03
DDX50Q9BQ39 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.5■■□□□ 1.03
DDX50Q9BQ39 CYP2T1P-201ENST00000432607 1285 ntBASIC21.5■■□□□ 1.03
DDX50Q9BQ39 AC083906.2-201ENST00000511578 360 ntBASIC21.5■■□□□ 1.03
DDX50Q9BQ39 AF201337.1-201ENST00000520239 748 ntBASIC21.5■■□□□ 1.03
DDX50Q9BQ39 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.5■■□□□ 1.03
DDX50Q9BQ39 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.5■■□□□ 1.03
DDX50Q9BQ39 AL109923.1-201ENST00000618799 583 ntBASIC21.5■■□□□ 1.03
DDX50Q9BQ39 AL050303.2-201ENST00000619798 666 ntBASIC21.5■■□□□ 1.03
DDX50Q9BQ39 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
DDX50Q9BQ39 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.5■■□□□ 1.03
DDX50Q9BQ39 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.5■■□□□ 1.03
DDX50Q9BQ39 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.5■■□□□ 1.03
DDX50Q9BQ39 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DDX50Q9BQ39 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.5■■□□□ 1.03
DDX50Q9BQ39 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
DDX50Q9BQ39 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
DDX50Q9BQ39 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX50Q9BQ39 HLA-L-209ENST00000420110 1011 ntBASIC21.49■■□□□ 1.03
DDX50Q9BQ39 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.49■■□□□ 1.03
DDX50Q9BQ39 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.49■■□□□ 1.03
DDX50Q9BQ39 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.49■■□□□ 1.03
DDX50Q9BQ39 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.49■■□□□ 1.03
DDX50Q9BQ39 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
DDX50Q9BQ39 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX50Q9BQ39 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX50Q9BQ39 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX50Q9BQ39 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
DDX50Q9BQ39 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
DDX50Q9BQ39 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX50Q9BQ39 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.49■■□□□ 1.03
DDX50Q9BQ39 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DDX50Q9BQ39 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
DDX50Q9BQ39 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DDX50Q9BQ39 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
DDX50Q9BQ39 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
DDX50Q9BQ39 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DDX50Q9BQ39 AC091799.1-201ENST00000422823 811 ntBASIC21.48■■□□□ 1.03
DDX50Q9BQ39 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.48■■□□□ 1.03
DDX50Q9BQ39 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.48■■□□□ 1.03
DDX50Q9BQ39 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.48■■□□□ 1.03
DDX50Q9BQ39 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DDX50Q9BQ39 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.48■■□□□ 1.03
DDX50Q9BQ39 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.48■■□□□ 1.03
DDX50Q9BQ39 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DDX50Q9BQ39 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
DDX50Q9BQ39 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
DDX50Q9BQ39 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DDX50Q9BQ39 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DDX50Q9BQ39 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms