Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAB40CQ96S21 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.73■□□□□ 0.27
RAB40CQ96S21 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB40CQ96S21 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RAB40CQ96S21 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAB40CQ96S21 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB40CQ96S21 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAB40CQ96S21 AK3-203ENST00000447596 705 ntTSL 2 BASIC16.73■□□□□ 0.27
RAB40CQ96S21 AP005435.1-201ENST00000529293 1178 ntBASIC16.73■□□□□ 0.27
RAB40CQ96S21 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC16.73■□□□□ 0.27
RAB40CQ96S21 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB40CQ96S21 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB40CQ96S21 FP700111.2-201ENST00000619190 1892 ntBASIC16.73■□□□□ 0.27
RAB40CQ96S21 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB40CQ96S21 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB40CQ96S21 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAB40CQ96S21 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB40CQ96S21 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RAB40CQ96S21 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.72■□□□□ 0.27
RAB40CQ96S21 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB40CQ96S21 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB40CQ96S21 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
RAB40CQ96S21 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB40CQ96S21 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.72■□□□□ 0.27
RAB40CQ96S21 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB40CQ96S21 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RAB40CQ96S21 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RAB40CQ96S21 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.72■□□□□ 0.27
RAB40CQ96S21 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB40CQ96S21 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB40CQ96S21 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RAB40CQ96S21 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RAB40CQ96S21 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB40CQ96S21 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.72■□□□□ 0.27
RAB40CQ96S21 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB40CQ96S21 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB40CQ96S21 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB40CQ96S21 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.72■□□□□ 0.27
RAB40CQ96S21 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.72■□□□□ 0.27
RAB40CQ96S21 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB40CQ96S21 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB40CQ96S21 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RAB40CQ96S21 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.72■□□□□ 0.27
RAB40CQ96S21 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RAB40CQ96S21 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.71■□□□□ 0.27
RAB40CQ96S21 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.71■□□□□ 0.27
RAB40CQ96S21 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB40CQ96S21 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RAB40CQ96S21 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RAB40CQ96S21 AC099778.1-201ENST00000568593 1911 ntBASIC16.71■□□□□ 0.27
RAB40CQ96S21 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB40CQ96S21 AL356441.2-201ENST00000443009 864 ntBASIC16.71■□□□□ 0.27
RAB40CQ96S21 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC16.71■□□□□ 0.27
RAB40CQ96S21 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB40CQ96S21 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB40CQ96S21 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB40CQ96S21 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB40CQ96S21 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RAB40CQ96S21 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB40CQ96S21 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB40CQ96S21 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RAB40CQ96S21 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RAB40CQ96S21 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB40CQ96S21 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.7■□□□□ 0.26
RAB40CQ96S21 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB40CQ96S21 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB40CQ96S21 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB40CQ96S21 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB40CQ96S21 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB40CQ96S21 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB40CQ96S21 SMG8-203ENST00000578922 2178 ntBASIC16.7■□□□□ 0.26
RAB40CQ96S21 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB40CQ96S21 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB40CQ96S21 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
RAB40CQ96S21 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
RAB40CQ96S21 AL356740.2-201ENST00000601559 647 ntBASIC16.7■□□□□ 0.26
RAB40CQ96S21 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC16.7■□□□□ 0.26
RAB40CQ96S21 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB40CQ96S21 AC112907.3-201ENST00000577781 2400 ntBASIC16.7■□□□□ 0.26
RAB40CQ96S21 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB40CQ96S21 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.7■□□□□ 0.26
RAB40CQ96S21 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB40CQ96S21 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
RAB40CQ96S21 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.7■□□□□ 0.26
RAB40CQ96S21 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.69■□□□□ 0.26
RAB40CQ96S21 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
RAB40CQ96S21 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RAB40CQ96S21 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB40CQ96S21 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB40CQ96S21 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RAB40CQ96S21 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB40CQ96S21 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC16.69■□□□□ 0.26
RAB40CQ96S21 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB40CQ96S21 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
RAB40CQ96S21 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB40CQ96S21 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB40CQ96S21 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC16.69■□□□□ 0.26
RAB40CQ96S21 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC16.69■□□□□ 0.26
RAB40CQ96S21 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RAB40CQ96S21 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms