Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 AC097493.4-201ENST00000641197 219 ntBASIC21.04■□□□□ 0.96
SHDQ96IW2 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHDQ96IW2 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHDQ96IW2 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
SHDQ96IW2 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.04■□□□□ 0.96
SHDQ96IW2 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHDQ96IW2 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SHDQ96IW2 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SHDQ96IW2 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SHDQ96IW2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SHDQ96IW2 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SHDQ96IW2 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.03■□□□□ 0.96
SHDQ96IW2 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.03■□□□□ 0.96
SHDQ96IW2 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.03■□□□□ 0.96
SHDQ96IW2 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SHDQ96IW2 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SHDQ96IW2 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.03■□□□□ 0.96
SHDQ96IW2 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.03■□□□□ 0.96
SHDQ96IW2 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.03■□□□□ 0.96
SHDQ96IW2 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SHDQ96IW2 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SHDQ96IW2 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SHDQ96IW2 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.03■□□□□ 0.96
SHDQ96IW2 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SHDQ96IW2 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
SHDQ96IW2 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SHDQ96IW2 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SHDQ96IW2 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SHDQ96IW2 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.02■□□□□ 0.96
SHDQ96IW2 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.02■□□□□ 0.96
SHDQ96IW2 RARRES2P10-201ENST00000564312 460 ntBASIC21.02■□□□□ 0.96
SHDQ96IW2 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.02■□□□□ 0.96
SHDQ96IW2 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SHDQ96IW2 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
SHDQ96IW2 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
SHDQ96IW2 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
SHDQ96IW2 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHDQ96IW2 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SHDQ96IW2 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
SHDQ96IW2 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
SHDQ96IW2 KRASP1-201ENST00000407852 552 ntBASIC21.01■□□□□ 0.95
SHDQ96IW2 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.01■□□□□ 0.95
SHDQ96IW2 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
SHDQ96IW2 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.01■□□□□ 0.95
SHDQ96IW2 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.01■□□□□ 0.95
SHDQ96IW2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SHDQ96IW2 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHDQ96IW2 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
SHDQ96IW2 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
SHDQ96IW2 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.01■□□□□ 0.95
SHDQ96IW2 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SHDQ96IW2 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHDQ96IW2 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
SHDQ96IW2 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.01■□□□□ 0.95
SHDQ96IW2 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SHDQ96IW2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHDQ96IW2 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.01■□□□□ 0.95
SHDQ96IW2 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHDQ96IW2 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21■□□□□ 0.95
SHDQ96IW2 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21■□□□□ 0.95
SHDQ96IW2 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21■□□□□ 0.95
SHDQ96IW2 PRKY-204ENST00000533551 1019 ntBASIC21■□□□□ 0.95
SHDQ96IW2 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21■□□□□ 0.95
SHDQ96IW2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21■□□□□ 0.95
SHDQ96IW2 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21■□□□□ 0.95
SHDQ96IW2 AC113410.3-201ENST00000623366 203 ntBASIC21■□□□□ 0.95
SHDQ96IW2 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SHDQ96IW2 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21■□□□□ 0.95
SHDQ96IW2 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21■□□□□ 0.95
SHDQ96IW2 AC116050.2-201ENST00000612102 1779 ntBASIC21■□□□□ 0.95
SHDQ96IW2 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHDQ96IW2 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SHDQ96IW2 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHDQ96IW2 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHDQ96IW2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHDQ96IW2 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SHDQ96IW2 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SHDQ96IW2 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
SHDQ96IW2 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SHDQ96IW2 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHDQ96IW2 AL390719.1-204ENST00000412397 1219 ntBASIC20.99■□□□□ 0.95
SHDQ96IW2 PGM5P4-201ENST00000421970 445 ntBASIC20.99■□□□□ 0.95
SHDQ96IW2 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHDQ96IW2 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHDQ96IW2 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.99■□□□□ 0.95
SHDQ96IW2 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.99■□□□□ 0.95
SHDQ96IW2 AC005829.2-201ENST00000571422 1056 ntBASIC20.99■□□□□ 0.95
SHDQ96IW2 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SHDQ96IW2 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.99■□□□□ 0.95
SHDQ96IW2 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHDQ96IW2 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.99■□□□□ 0.95
SHDQ96IW2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.99■□□□□ 0.95
SHDQ96IW2 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SHDQ96IW2 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SHDQ96IW2 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHDQ96IW2 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHDQ96IW2 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
SHDQ96IW2 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SHDQ96IW2 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SHDQ96IW2 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms