Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.92■□□□□ 0.62
TRUB1Q8WWH5 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.92■□□□□ 0.62
TRUB1Q8WWH5 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TRUB1Q8WWH5 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TRUB1Q8WWH5 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRUB1Q8WWH5 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRUB1Q8WWH5 AC007225.1-201ENST00000566331 1836 ntBASIC18.92■□□□□ 0.62
TRUB1Q8WWH5 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRUB1Q8WWH5 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.92■□□□□ 0.62
TRUB1Q8WWH5 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRUB1Q8WWH5 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.92■□□□□ 0.62
TRUB1Q8WWH5 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRUB1Q8WWH5 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRUB1Q8WWH5 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.91■□□□□ 0.62
TRUB1Q8WWH5 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
TRUB1Q8WWH5 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRUB1Q8WWH5 AC027702.1-201ENST00000563810 1770 ntBASIC18.91■□□□□ 0.62
TRUB1Q8WWH5 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.91■□□□□ 0.62
TRUB1Q8WWH5 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRUB1Q8WWH5 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.91■□□□□ 0.62
TRUB1Q8WWH5 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
TRUB1Q8WWH5 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRUB1Q8WWH5 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
TRUB1Q8WWH5 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRUB1Q8WWH5 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRUB1Q8WWH5 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TRUB1Q8WWH5 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRUB1Q8WWH5 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRUB1Q8WWH5 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
TRUB1Q8WWH5 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
TRUB1Q8WWH5 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRUB1Q8WWH5 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRUB1Q8WWH5 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRUB1Q8WWH5 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRUB1Q8WWH5 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.9■□□□□ 0.62
TRUB1Q8WWH5 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRUB1Q8WWH5 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRUB1Q8WWH5 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
TRUB1Q8WWH5 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TRUB1Q8WWH5 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRUB1Q8WWH5 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRUB1Q8WWH5 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.9■□□□□ 0.62
TRUB1Q8WWH5 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRUB1Q8WWH5 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.9■□□□□ 0.62
TRUB1Q8WWH5 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.9■□□□□ 0.62
TRUB1Q8WWH5 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.9■□□□□ 0.62
TRUB1Q8WWH5 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRUB1Q8WWH5 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TRUB1Q8WWH5 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TRUB1Q8WWH5 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TRUB1Q8WWH5 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TRUB1Q8WWH5 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TRUB1Q8WWH5 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
TRUB1Q8WWH5 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TRUB1Q8WWH5 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.9■□□□□ 0.62
TRUB1Q8WWH5 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TRUB1Q8WWH5 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.9■□□□□ 0.62
TRUB1Q8WWH5 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRUB1Q8WWH5 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRUB1Q8WWH5 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRUB1Q8WWH5 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
TRUB1Q8WWH5 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRUB1Q8WWH5 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRUB1Q8WWH5 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
TRUB1Q8WWH5 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
TRUB1Q8WWH5 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRUB1Q8WWH5 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.89■□□□□ 0.61
TRUB1Q8WWH5 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.89■□□□□ 0.61
TRUB1Q8WWH5 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRUB1Q8WWH5 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRUB1Q8WWH5 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRUB1Q8WWH5 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.89■□□□□ 0.61
TRUB1Q8WWH5 UNC93B8-201ENST00000511903 705 ntBASIC18.89■□□□□ 0.61
TRUB1Q8WWH5 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.89■□□□□ 0.61
TRUB1Q8WWH5 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TRUB1Q8WWH5 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.89■□□□□ 0.61
TRUB1Q8WWH5 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRUB1Q8WWH5 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.89■□□□□ 0.61
TRUB1Q8WWH5 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRUB1Q8WWH5 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRUB1Q8WWH5 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.89■□□□□ 0.61
TRUB1Q8WWH5 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
TRUB1Q8WWH5 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
TRUB1Q8WWH5 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TRUB1Q8WWH5 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRUB1Q8WWH5 TNXA-203ENST00000507684 2038 ntBASIC18.88■□□□□ 0.61
TRUB1Q8WWH5 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRUB1Q8WWH5 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRUB1Q8WWH5 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.88■□□□□ 0.61
TRUB1Q8WWH5 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRUB1Q8WWH5 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.88■□□□□ 0.61
TRUB1Q8WWH5 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRUB1Q8WWH5 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.88■□□□□ 0.61
TRUB1Q8WWH5 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.88■□□□□ 0.61
TRUB1Q8WWH5 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TRUB1Q8WWH5 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TRUB1Q8WWH5 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRUB1Q8WWH5 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.88■□□□□ 0.61
TRUB1Q8WWH5 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRUB1Q8WWH5 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms