Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.87■■□□□ 1.09
PRUNE2Q8WUY3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
PRUNE2Q8WUY3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PRUNE2Q8WUY3 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
PRUNE2Q8WUY3 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PRUNE2Q8WUY3 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.87■■□□□ 1.09
PRUNE2Q8WUY3 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.87■■□□□ 1.09
PRUNE2Q8WUY3 AC243732.1-201ENST00000612648 864 ntBASIC21.87■■□□□ 1.09
PRUNE2Q8WUY3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PRUNE2Q8WUY3 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PRUNE2Q8WUY3 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PRUNE2Q8WUY3 AC010947.1-201ENST00000623454 693 ntBASIC21.87■■□□□ 1.09
PRUNE2Q8WUY3 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PRUNE2Q8WUY3 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.86■■□□□ 1.09
PRUNE2Q8WUY3 AC003102.1-202ENST00000563394 1796 ntBASIC21.86■■□□□ 1.09
PRUNE2Q8WUY3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PRUNE2Q8WUY3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
PRUNE2Q8WUY3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.86■■□□□ 1.09
PRUNE2Q8WUY3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.86■■□□□ 1.09
PRUNE2Q8WUY3 AL031963.3-201ENST00000606441 850 ntBASIC21.86■■□□□ 1.09
PRUNE2Q8WUY3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PRUNE2Q8WUY3 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PRUNE2Q8WUY3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.86■■□□□ 1.09
PRUNE2Q8WUY3 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.86■■□□□ 1.09
PRUNE2Q8WUY3 RBM17P1-201ENST00000453646 1190 ntBASIC21.86■■□□□ 1.09
PRUNE2Q8WUY3 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.86■■□□□ 1.09
PRUNE2Q8WUY3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
PRUNE2Q8WUY3 AC091076.1-201ENST00000610741 619 ntBASIC21.86■■□□□ 1.09
PRUNE2Q8WUY3 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PRUNE2Q8WUY3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.85■■□□□ 1.09
PRUNE2Q8WUY3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.85■■□□□ 1.09
PRUNE2Q8WUY3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PRUNE2Q8WUY3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PRUNE2Q8WUY3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
PRUNE2Q8WUY3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.85■■□□□ 1.09
PRUNE2Q8WUY3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.85■■□□□ 1.09
PRUNE2Q8WUY3 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PRUNE2Q8WUY3 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
PRUNE2Q8WUY3 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PRUNE2Q8WUY3 AC006011.2-201ENST00000621313 1158 ntBASIC21.85■■□□□ 1.09
PRUNE2Q8WUY3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
PRUNE2Q8WUY3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PRUNE2Q8WUY3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.85■■□□□ 1.09
PRUNE2Q8WUY3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PRUNE2Q8WUY3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
PRUNE2Q8WUY3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PRUNE2Q8WUY3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC21.84■■□□□ 1.09
PRUNE2Q8WUY3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.84■■□□□ 1.09
PRUNE2Q8WUY3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.84■■□□□ 1.09
PRUNE2Q8WUY3 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.84■■□□□ 1.09
PRUNE2Q8WUY3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
PRUNE2Q8WUY3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PRUNE2Q8WUY3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
PRUNE2Q8WUY3 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.84■■□□□ 1.09
PRUNE2Q8WUY3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PRUNE2Q8WUY3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PRUNE2Q8WUY3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PRUNE2Q8WUY3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.83■■□□□ 1.09
PRUNE2Q8WUY3 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.83■■□□□ 1.09
PRUNE2Q8WUY3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
PRUNE2Q8WUY3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
PRUNE2Q8WUY3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PRUNE2Q8WUY3 AC027702.1-201ENST00000563810 1770 ntBASIC21.83■■□□□ 1.09
PRUNE2Q8WUY3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PRUNE2Q8WUY3 KRASP1-201ENST00000407852 552 ntBASIC21.83■■□□□ 1.09
PRUNE2Q8WUY3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
PRUNE2Q8WUY3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PRUNE2Q8WUY3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
PRUNE2Q8WUY3 LINC01124-201ENST00000409786 2117 ntBASIC21.83■■□□□ 1.08
PRUNE2Q8WUY3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.83■■□□□ 1.08
PRUNE2Q8WUY3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PRUNE2Q8WUY3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PRUNE2Q8WUY3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PRUNE2Q8WUY3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PRUNE2Q8WUY3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC21.82■■□□□ 1.08
PRUNE2Q8WUY3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.82■■□□□ 1.08
PRUNE2Q8WUY3 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PRUNE2Q8WUY3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
PRUNE2Q8WUY3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PRUNE2Q8WUY3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.82■■□□□ 1.08
PRUNE2Q8WUY3 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.82■■□□□ 1.08
PRUNE2Q8WUY3 AC008175.2-201ENST00000612840 297 ntBASIC21.82■■□□□ 1.08
PRUNE2Q8WUY3 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC21.82■■□□□ 1.08
PRUNE2Q8WUY3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
PRUNE2Q8WUY3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRUNE2Q8WUY3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRUNE2Q8WUY3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.81■■□□□ 1.08
PRUNE2Q8WUY3 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PRUNE2Q8WUY3 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRUNE2Q8WUY3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRUNE2Q8WUY3 LINC01568-207ENST00000641790 1380 ntBASIC21.81■■□□□ 1.08
PRUNE2Q8WUY3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.81■■□□□ 1.08
PRUNE2Q8WUY3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
PRUNE2Q8WUY3 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.81■■□□□ 1.08
PRUNE2Q8WUY3 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRUNE2Q8WUY3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PRUNE2Q8WUY3 KRT18P48-201ENST00000434763 852 ntBASIC21.81■■□□□ 1.08
PRUNE2Q8WUY3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
PRUNE2Q8WUY3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.81■■□□□ 1.08
PRUNE2Q8WUY3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms