Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
TMC1Q8TDI8 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
TMC1Q8TDI8 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC28.79■■■□□ 2.2
TMC1Q8TDI8 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC28.79■■■□□ 2.2
TMC1Q8TDI8 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
TMC1Q8TDI8 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC28.79■■■□□ 2.2
TMC1Q8TDI8 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC28.79■■■□□ 2.2
TMC1Q8TDI8 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
TMC1Q8TDI8 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
TMC1Q8TDI8 AL137060.1-201ENST00000618151 2648 ntBASIC28.79■■■□□ 2.2
TMC1Q8TDI8 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC28.79■■■□□ 2.2
TMC1Q8TDI8 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
TMC1Q8TDI8 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
TMC1Q8TDI8 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
TMC1Q8TDI8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC28.78■■■□□ 2.2
TMC1Q8TDI8 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
TMC1Q8TDI8 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC28.78■■■□□ 2.2
TMC1Q8TDI8 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC28.78■■■□□ 2.2
TMC1Q8TDI8 TBCB-214ENST00000629269 413 ntTSL 5 BASIC28.78■■■□□ 2.2
TMC1Q8TDI8 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC28.78■■■□□ 2.2
TMC1Q8TDI8 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC28.77■■■□□ 2.2
TMC1Q8TDI8 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
TMC1Q8TDI8 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
TMC1Q8TDI8 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
TMC1Q8TDI8 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC28.77■■■□□ 2.2
TMC1Q8TDI8 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
TMC1Q8TDI8 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC28.77■■■□□ 2.2
TMC1Q8TDI8 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
TMC1Q8TDI8 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC28.77■■■□□ 2.2
TMC1Q8TDI8 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
TMC1Q8TDI8 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC28.77■■■□□ 2.2
TMC1Q8TDI8 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC28.77■■■□□ 2.2
TMC1Q8TDI8 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
TMC1Q8TDI8 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC28.76■■■□□ 2.19
TMC1Q8TDI8 Z98882.1-201ENST00000622160 2253 ntBASIC28.76■■■□□ 2.19
TMC1Q8TDI8 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
TMC1Q8TDI8 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC28.76■■■□□ 2.19
TMC1Q8TDI8 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
TMC1Q8TDI8 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC28.76■■■□□ 2.19
TMC1Q8TDI8 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC28.76■■■□□ 2.19
TMC1Q8TDI8 AL355472.2-201ENST00000422958 438 ntBASIC28.76■■■□□ 2.19
TMC1Q8TDI8 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC28.76■■■□□ 2.19
TMC1Q8TDI8 RNA5SP413-201ENST00000516373 109 ntBASIC28.76■■■□□ 2.19
TMC1Q8TDI8 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC28.76■■■□□ 2.19
TMC1Q8TDI8 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
TMC1Q8TDI8 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
TMC1Q8TDI8 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
TMC1Q8TDI8 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
TMC1Q8TDI8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC28.75■■■□□ 2.19
TMC1Q8TDI8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC28.75■■■□□ 2.19
TMC1Q8TDI8 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
TMC1Q8TDI8 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
TMC1Q8TDI8 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
TMC1Q8TDI8 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC28.75■■■□□ 2.19
TMC1Q8TDI8 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC28.75■■■□□ 2.19
TMC1Q8TDI8 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC28.75■■■□□ 2.19
TMC1Q8TDI8 CASP6-205ENST00000505486 538 ntTSL 4 BASIC28.75■■■□□ 2.19
TMC1Q8TDI8 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
TMC1Q8TDI8 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
TMC1Q8TDI8 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC28.74■■■□□ 2.19
TMC1Q8TDI8 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
TMC1Q8TDI8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC28.74■■■□□ 2.19
TMC1Q8TDI8 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
TMC1Q8TDI8 CDV3P1-201ENST00000471403 739 ntBASIC28.74■■■□□ 2.19
TMC1Q8TDI8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC28.74■■■□□ 2.19
TMC1Q8TDI8 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
TMC1Q8TDI8 TMEM191A-211ENST00000637163 1067 ntBASIC28.74■■■□□ 2.19
TMC1Q8TDI8 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
TMC1Q8TDI8 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC28.74■■■□□ 2.19
TMC1Q8TDI8 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC28.74■■■□□ 2.19
TMC1Q8TDI8 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
TMC1Q8TDI8 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC28.73■■■□□ 2.19
TMC1Q8TDI8 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC28.73■■■□□ 2.19
TMC1Q8TDI8 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
TMC1Q8TDI8 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC28.73■■■□□ 2.19
TMC1Q8TDI8 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
TMC1Q8TDI8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC28.73■■■□□ 2.19
TMC1Q8TDI8 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
TMC1Q8TDI8 OR2A1-AS1-201ENST00000462305 773 ntBASIC28.73■■■□□ 2.19
TMC1Q8TDI8 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC28.73■■■□□ 2.19
TMC1Q8TDI8 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC28.73■■■□□ 2.19
TMC1Q8TDI8 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC28.73■■■□□ 2.19
TMC1Q8TDI8 AC083880.1-201ENST00000608266 535 ntBASIC28.73■■■□□ 2.19
TMC1Q8TDI8 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC28.73■■■□□ 2.19
TMC1Q8TDI8 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC28.73■■■□□ 2.19
TMC1Q8TDI8 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
TMC1Q8TDI8 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC28.73■■■□□ 2.19
TMC1Q8TDI8 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC28.73■■■□□ 2.19
TMC1Q8TDI8 EFS-203ENST00000429593 2610 ntTSL 2 BASIC28.73■■■□□ 2.19
TMC1Q8TDI8 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
TMC1Q8TDI8 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
TMC1Q8TDI8 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
TMC1Q8TDI8 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC28.72■■■□□ 2.19
TMC1Q8TDI8 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
TMC1Q8TDI8 DUSP5P2-201ENST00000426873 1033 ntBASIC28.72■■■□□ 2.19
TMC1Q8TDI8 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC28.72■■■□□ 2.19
TMC1Q8TDI8 FAM21FP-204ENST00000608637 956 ntBASIC28.72■■■□□ 2.19
TMC1Q8TDI8 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC28.72■■■□□ 2.19
TMC1Q8TDI8 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
TMC1Q8TDI8 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC28.72■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms