Protein–RNA interactions for Protein: Q6YHK3

CD109, CD109 antigen, humanhuman

Predictions only

Length 1,445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD109Q6YHK3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC31.89■■■□□ 2.7
CD109Q6YHK3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC31.89■■■□□ 2.7
CD109Q6YHK3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CD109Q6YHK3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC31.89■■■□□ 2.7
CD109Q6YHK3 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC31.89■■■□□ 2.7
CD109Q6YHK3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC31.89■■■□□ 2.69
CD109Q6YHK3 AC139530.1-201ENST00000575312 1977 ntBASIC31.88■■■□□ 2.69
CD109Q6YHK3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC31.88■■■□□ 2.69
CD109Q6YHK3 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC31.88■■■□□ 2.69
CD109Q6YHK3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
CD109Q6YHK3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC31.88■■■□□ 2.69
CD109Q6YHK3 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
CD109Q6YHK3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC31.88■■■□□ 2.69
CD109Q6YHK3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
CD109Q6YHK3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC31.88■■■□□ 2.69
CD109Q6YHK3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC31.88■■■□□ 2.69
CD109Q6YHK3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC31.88■■■□□ 2.69
CD109Q6YHK3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC31.88■■■□□ 2.69
CD109Q6YHK3 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
CD109Q6YHK3 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
CD109Q6YHK3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC31.87■■■□□ 2.69
CD109Q6YHK3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC31.87■■■□□ 2.69
CD109Q6YHK3 SAPCD2P4-201ENST00000424595 1171 ntBASIC31.87■■■□□ 2.69
CD109Q6YHK3 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CD109Q6YHK3 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC31.87■■■□□ 2.69
CD109Q6YHK3 C11orf96-202ENST00000528572 1834 ntBASIC31.87■■■□□ 2.69
CD109Q6YHK3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CD109Q6YHK3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
CD109Q6YHK3 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
CD109Q6YHK3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC31.86■■■□□ 2.69
CD109Q6YHK3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC31.86■■■□□ 2.69
CD109Q6YHK3 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC31.86■■■□□ 2.69
CD109Q6YHK3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
CD109Q6YHK3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC31.86■■■□□ 2.69
CD109Q6YHK3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC31.86■■■□□ 2.69
CD109Q6YHK3 AC005521.1-201ENST00000393351 872 ntBASIC31.85■■■□□ 2.69
CD109Q6YHK3 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CD109Q6YHK3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CD109Q6YHK3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
CD109Q6YHK3 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC31.85■■■□□ 2.69
CD109Q6YHK3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CD109Q6YHK3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC31.84■■■□□ 2.69
CD109Q6YHK3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC31.84■■■□□ 2.69
CD109Q6YHK3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC31.84■■■□□ 2.69
CD109Q6YHK3 AC005363.2-201ENST00000618631 242 ntBASIC31.84■■■□□ 2.69
CD109Q6YHK3 AC006557.6-201ENST00000623071 864 ntBASIC31.84■■■□□ 2.69
CD109Q6YHK3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CD109Q6YHK3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC31.84■■■□□ 2.69
CD109Q6YHK3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC31.84■■■□□ 2.69
CD109Q6YHK3 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CD109Q6YHK3 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CD109Q6YHK3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC31.83■■■□□ 2.69
CD109Q6YHK3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC31.83■■■□□ 2.69
CD109Q6YHK3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC31.83■■■□□ 2.69
CD109Q6YHK3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC31.83■■■□□ 2.69
CD109Q6YHK3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
CD109Q6YHK3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC31.83■■■□□ 2.69
CD109Q6YHK3 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
CD109Q6YHK3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC31.83■■■□□ 2.69
CD109Q6YHK3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC31.83■■■□□ 2.69
CD109Q6YHK3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CD109Q6YHK3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CD109Q6YHK3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC31.83■■■□□ 2.69
CD109Q6YHK3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC31.83■■■□□ 2.69
CD109Q6YHK3 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CD109Q6YHK3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC31.82■■■□□ 2.68
CD109Q6YHK3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CD109Q6YHK3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC31.82■■■□□ 2.68
CD109Q6YHK3 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC31.82■■■□□ 2.68
CD109Q6YHK3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CD109Q6YHK3 KRT8P9-201ENST00000558927 1449 ntBASIC31.81■■■□□ 2.68
CD109Q6YHK3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC31.81■■■□□ 2.68
CD109Q6YHK3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CD109Q6YHK3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC31.81■■■□□ 2.68
CD109Q6YHK3 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
CD109Q6YHK3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CD109Q6YHK3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CD109Q6YHK3 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC31.81■■■□□ 2.68
CD109Q6YHK3 AL355355.2-201ENST00000442321 338 ntBASIC31.81■■■□□ 2.68
CD109Q6YHK3 AC087633.2-202ENST00000565166 1439 ntBASIC31.81■■■□□ 2.68
CD109Q6YHK3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
CD109Q6YHK3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CD109Q6YHK3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CD109Q6YHK3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CD109Q6YHK3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CD109Q6YHK3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CD109Q6YHK3 AC113347.1-201ENST00000413321 391 ntBASIC31.8■■■□□ 2.68
CD109Q6YHK3 AF186192.3-201ENST00000583427 947 ntBASIC31.8■■■□□ 2.68
CD109Q6YHK3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC31.8■■■□□ 2.68
CD109Q6YHK3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CD109Q6YHK3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC31.8■■■□□ 2.68
CD109Q6YHK3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
CD109Q6YHK3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
CD109Q6YHK3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CD109Q6YHK3 CREM-210ENST00000374721 2020 ntTSL 5 BASIC31.79■■■□□ 2.68
CD109Q6YHK3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC31.79■■■□□ 2.68
CD109Q6YHK3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC31.79■■■□□ 2.68
CD109Q6YHK3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC31.79■■■□□ 2.68
CD109Q6YHK3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC31.79■■■□□ 2.68
CD109Q6YHK3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC31.79■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms