Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
LPCAT4Q643R3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LPCAT4Q643R3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LPCAT4Q643R3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LPCAT4Q643R3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.49■□□□□ 0.71
LPCAT4Q643R3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LPCAT4Q643R3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LPCAT4Q643R3 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.49■□□□□ 0.71
LPCAT4Q643R3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LPCAT4Q643R3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LPCAT4Q643R3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.49■□□□□ 0.71
LPCAT4Q643R3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.49■□□□□ 0.71
LPCAT4Q643R3 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.49■□□□□ 0.71
LPCAT4Q643R3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.49■□□□□ 0.71
LPCAT4Q643R3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
LPCAT4Q643R3 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LPCAT4Q643R3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LPCAT4Q643R3 NEFHP1-201ENST00000412845 2629 ntBASIC19.49■□□□□ 0.71
LPCAT4Q643R3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LPCAT4Q643R3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LPCAT4Q643R3 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.49■□□□□ 0.71
LPCAT4Q643R3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
LPCAT4Q643R3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LPCAT4Q643R3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.49■□□□□ 0.71
LPCAT4Q643R3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LPCAT4Q643R3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LPCAT4Q643R3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.48■□□□□ 0.71
LPCAT4Q643R3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.48■□□□□ 0.71
LPCAT4Q643R3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LPCAT4Q643R3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LPCAT4Q643R3 BHLHE23-202ENST00000612929 1109 ntBASIC19.48■□□□□ 0.71
LPCAT4Q643R3 LETM1P2-201ENST00000597330 2178 ntBASIC19.48■□□□□ 0.71
LPCAT4Q643R3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
LPCAT4Q643R3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LPCAT4Q643R3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.48■□□□□ 0.71
LPCAT4Q643R3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LPCAT4Q643R3 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LPCAT4Q643R3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LPCAT4Q643R3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LPCAT4Q643R3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
LPCAT4Q643R3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LPCAT4Q643R3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LPCAT4Q643R3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LPCAT4Q643R3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LPCAT4Q643R3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LPCAT4Q643R3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.47■□□□□ 0.71
LPCAT4Q643R3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.47■□□□□ 0.71
LPCAT4Q643R3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LPCAT4Q643R3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
LPCAT4Q643R3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LPCAT4Q643R3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LPCAT4Q643R3 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.47■□□□□ 0.71
LPCAT4Q643R3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.46■□□□□ 0.71
LPCAT4Q643R3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
LPCAT4Q643R3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.46■□□□□ 0.71
LPCAT4Q643R3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.46■□□□□ 0.71
LPCAT4Q643R3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LPCAT4Q643R3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.46■□□□□ 0.71
LPCAT4Q643R3 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.46■□□□□ 0.71
LPCAT4Q643R3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
LPCAT4Q643R3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LPCAT4Q643R3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LPCAT4Q643R3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LPCAT4Q643R3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
LPCAT4Q643R3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LPCAT4Q643R3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
LPCAT4Q643R3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LPCAT4Q643R3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.7
LPCAT4Q643R3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LPCAT4Q643R3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
LPCAT4Q643R3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
LPCAT4Q643R3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.45■□□□□ 0.7
LPCAT4Q643R3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LPCAT4Q643R3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LPCAT4Q643R3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LPCAT4Q643R3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.45■□□□□ 0.7
LPCAT4Q643R3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.45■□□□□ 0.7
LPCAT4Q643R3 ABHD17AP5-201ENST00000580133 923 ntBASIC19.45■□□□□ 0.7
LPCAT4Q643R3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LPCAT4Q643R3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
LPCAT4Q643R3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LPCAT4Q643R3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LPCAT4Q643R3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LPCAT4Q643R3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LPCAT4Q643R3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
LPCAT4Q643R3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.44■□□□□ 0.7
LPCAT4Q643R3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
LPCAT4Q643R3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
LPCAT4Q643R3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LPCAT4Q643R3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LPCAT4Q643R3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.44■□□□□ 0.7
LPCAT4Q643R3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
LPCAT4Q643R3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LPCAT4Q643R3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LPCAT4Q643R3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LPCAT4Q643R3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LPCAT4Q643R3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.44■□□□□ 0.7
LPCAT4Q643R3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LPCAT4Q643R3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.44■□□□□ 0.7
LPCAT4Q643R3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms