Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
RNF213Q63HN8 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
RNF213Q63HN8 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
RNF213Q63HN8 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
RNF213Q63HN8 INGX-201ENST00000359239 846 ntBASIC11.2□□□□□ -0.62
RNF213Q63HN8 AL355385.1-201ENST00000606123 409 ntBASIC11.2□□□□□ -0.62
RNF213Q63HN8 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
RNF213Q63HN8 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RNF213Q63HN8 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC11.2□□□□□ -0.62
RNF213Q63HN8 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RNF213Q63HN8 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RNF213Q63HN8 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC11.2□□□□□ -0.62
RNF213Q63HN8 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RNF213Q63HN8 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC11.2□□□□□ -0.62
RNF213Q63HN8 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC11.2□□□□□ -0.62
RNF213Q63HN8 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RNF213Q63HN8 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC11.2□□□□□ -0.62
RNF213Q63HN8 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC11.2□□□□□ -0.62
RNF213Q63HN8 AL359075.1-203ENST00000462729 1002 ntBASIC11.2□□□□□ -0.62
RNF213Q63HN8 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
RNF213Q63HN8 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
RNF213Q63HN8 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC11.2□□□□□ -0.62
RNF213Q63HN8 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RNF213Q63HN8 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC11.2□□□□□ -0.62
RNF213Q63HN8 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RNF213Q63HN8 NUDT16P1-203ENST00000513809 620 ntBASIC11.2□□□□□ -0.62
RNF213Q63HN8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC11.2□□□□□ -0.62
RNF213Q63HN8 REXO2-208ENST00000539754 791 ntTSL 2 BASIC11.2□□□□□ -0.62
RNF213Q63HN8 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC11.2□□□□□ -0.62
RNF213Q63HN8 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
RNF213Q63HN8 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC11.2□□□□□ -0.62
RNF213Q63HN8 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC11.19□□□□□ -0.62
RNF213Q63HN8 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC11.19□□□□□ -0.62
RNF213Q63HN8 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
RNF213Q63HN8 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RNF213Q63HN8 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC11.19□□□□□ -0.62
RNF213Q63HN8 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RNF213Q63HN8 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RNF213Q63HN8 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RNF213Q63HN8 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
RNF213Q63HN8 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC11.19□□□□□ -0.62
RNF213Q63HN8 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC11.19□□□□□ -0.62
RNF213Q63HN8 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RNF213Q63HN8 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
RNF213Q63HN8 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC11.19□□□□□ -0.62
RNF213Q63HN8 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
RNF213Q63HN8 LINC00543-201ENST00000567234 1845 ntBASIC11.19□□□□□ -0.62
RNF213Q63HN8 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RNF213Q63HN8 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC11.19□□□□□ -0.62
RNF213Q63HN8 MIR1238-201ENST00000408483 83 ntBASIC11.19□□□□□ -0.62
RNF213Q63HN8 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RNF213Q63HN8 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RNF213Q63HN8 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC11.19□□□□□ -0.62
RNF213Q63HN8 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC11.19□□□□□ -0.62
RNF213Q63HN8 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC11.19□□□□□ -0.62
RNF213Q63HN8 CKBP1-201ENST00000565489 1086 ntBASIC11.19□□□□□ -0.62
RNF213Q63HN8 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RNF213Q63HN8 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RNF213Q63HN8 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RNF213Q63HN8 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
RNF213Q63HN8 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
RNF213Q63HN8 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC11.19□□□□□ -0.62
RNF213Q63HN8 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC11.19□□□□□ -0.62
RNF213Q63HN8 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RNF213Q63HN8 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC11.19□□□□□ -0.62
RNF213Q63HN8 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
RNF213Q63HN8 AP006587.3-201ENST00000525742 1516 ntBASIC11.18□□□□□ -0.62
RNF213Q63HN8 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
RNF213Q63HN8 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RNF213Q63HN8 AL671277.2-201ENST00000458060 996 ntBASIC11.18□□□□□ -0.62
RNF213Q63HN8 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RNF213Q63HN8 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC11.18□□□□□ -0.62
RNF213Q63HN8 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC11.18□□□□□ -0.62
RNF213Q63HN8 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
RNF213Q63HN8 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RNF213Q63HN8 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
RNF213Q63HN8 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RNF213Q63HN8 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC11.18□□□□□ -0.62
RNF213Q63HN8 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RNF213Q63HN8 FAM87A-204ENST00000613235 858 ntBASIC11.18□□□□□ -0.62
RNF213Q63HN8 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
RNF213Q63HN8 NXN-202ENST00000537628 1340 ntTSL 3 BASIC11.18□□□□□ -0.62
RNF213Q63HN8 KRT18P13-201ENST00000400056 1290 ntBASIC11.18□□□□□ -0.62
RNF213Q63HN8 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RNF213Q63HN8 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC11.18□□□□□ -0.62
RNF213Q63HN8 GPX4-207ENST00000589115 812 ntTSL 2 BASIC11.18□□□□□ -0.62
RNF213Q63HN8 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RNF213Q63HN8 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RNF213Q63HN8 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RNF213Q63HN8 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC11.18□□□□□ -0.62
RNF213Q63HN8 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RNF213Q63HN8 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RNF213Q63HN8 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
RNF213Q63HN8 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RNF213Q63HN8 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC11.18□□□□□ -0.62
RNF213Q63HN8 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RNF213Q63HN8 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RNF213Q63HN8 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
RNF213Q63HN8 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RNF213Q63HN8 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC11.17□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms