Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC073314.1-201ENST00000568729 2216 ntBASIC19.83■□□□□ 0.77
RNF220Q5VTB9 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.83■□□□□ 0.77
RNF220Q5VTB9 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF220Q5VTB9 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF220Q5VTB9 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF220Q5VTB9 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RNF220Q5VTB9 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RNF220Q5VTB9 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.83■□□□□ 0.77
RNF220Q5VTB9 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.83■□□□□ 0.77
RNF220Q5VTB9 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF220Q5VTB9 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.83■□□□□ 0.76
RNF220Q5VTB9 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RNF220Q5VTB9 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.83■□□□□ 0.76
RNF220Q5VTB9 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF220Q5VTB9 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF220Q5VTB9 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF220Q5VTB9 AC004408.2-201ENST00000623613 2777 ntBASIC19.82■□□□□ 0.76
RNF220Q5VTB9 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.82■□□□□ 0.76
RNF220Q5VTB9 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.82■□□□□ 0.76
RNF220Q5VTB9 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
RNF220Q5VTB9 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.82■□□□□ 0.76
RNF220Q5VTB9 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
RNF220Q5VTB9 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF220Q5VTB9 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
RNF220Q5VTB9 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RNF220Q5VTB9 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.82■□□□□ 0.76
RNF220Q5VTB9 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
RNF220Q5VTB9 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RNF220Q5VTB9 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF220Q5VTB9 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF220Q5VTB9 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF220Q5VTB9 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF220Q5VTB9 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF220Q5VTB9 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF220Q5VTB9 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF220Q5VTB9 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF220Q5VTB9 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RNF220Q5VTB9 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF220Q5VTB9 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
RNF220Q5VTB9 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
RNF220Q5VTB9 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.8■□□□□ 0.76
RNF220Q5VTB9 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF220Q5VTB9 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.8■□□□□ 0.76
RNF220Q5VTB9 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF220Q5VTB9 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RNF220Q5VTB9 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF220Q5VTB9 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF220Q5VTB9 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF220Q5VTB9 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
RNF220Q5VTB9 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF220Q5VTB9 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF220Q5VTB9 AC131212.1-201ENST00000613771 668 ntBASIC19.8■□□□□ 0.76
RNF220Q5VTB9 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF220Q5VTB9 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF220Q5VTB9 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
RNF220Q5VTB9 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RNF220Q5VTB9 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF220Q5VTB9 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF220Q5VTB9 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF220Q5VTB9 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.8■□□□□ 0.76
RNF220Q5VTB9 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF220Q5VTB9 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF220Q5VTB9 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF220Q5VTB9 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF220Q5VTB9 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
RNF220Q5VTB9 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF220Q5VTB9 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF220Q5VTB9 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF220Q5VTB9 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF220Q5VTB9 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF220Q5VTB9 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF220Q5VTB9 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF220Q5VTB9 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF220Q5VTB9 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF220Q5VTB9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RNF220Q5VTB9 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
RNF220Q5VTB9 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF220Q5VTB9 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF220Q5VTB9 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF220Q5VTB9 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF220Q5VTB9 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF220Q5VTB9 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.78■□□□□ 0.76
RNF220Q5VTB9 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF220Q5VTB9 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.78■□□□□ 0.76
RNF220Q5VTB9 AL034346.1-201ENST00000568244 1277 ntBASIC19.78■□□□□ 0.76
RNF220Q5VTB9 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF220Q5VTB9 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF220Q5VTB9 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF220Q5VTB9 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF220Q5VTB9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF220Q5VTB9 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF220Q5VTB9 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF220Q5VTB9 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF220Q5VTB9 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF220Q5VTB9 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RNF220Q5VTB9 UNC93B3-201ENST00000308076 687 ntBASIC19.77■□□□□ 0.76
RNF220Q5VTB9 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF220Q5VTB9 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF220Q5VTB9 BX842568.3-201ENST00000418104 571 ntBASIC19.77■□□□□ 0.76
RNF220Q5VTB9 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms