Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
SNAPC4Q5SXM2 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
SNAPC4Q5SXM2 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
SNAPC4Q5SXM2 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
SNAPC4Q5SXM2 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
SNAPC4Q5SXM2 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC34.25■■■■□ 3.07
SNAPC4Q5SXM2 AP003071.4-201ENST00000562276 1284 ntBASIC34.25■■■■□ 3.07
SNAPC4Q5SXM2 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
SNAPC4Q5SXM2 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC34.25■■■■□ 3.07
SNAPC4Q5SXM2 CABP2-204ENST00000636477 941 ntTSL 5 BASIC34.25■■■■□ 3.07
SNAPC4Q5SXM2 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC34.25■■■■□ 3.07
SNAPC4Q5SXM2 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC34.25■■■■□ 3.07
SNAPC4Q5SXM2 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC34.25■■■■□ 3.07
SNAPC4Q5SXM2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC34.24■■■■□ 3.07
SNAPC4Q5SXM2 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
SNAPC4Q5SXM2 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC34.24■■■■□ 3.07
SNAPC4Q5SXM2 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
SNAPC4Q5SXM2 C11orf96-202ENST00000528572 1834 ntBASIC34.24■■■■□ 3.07
SNAPC4Q5SXM2 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC34.24■■■■□ 3.07
SNAPC4Q5SXM2 AC120498.8-201ENST00000614275 531 ntBASIC34.24■■■■□ 3.07
SNAPC4Q5SXM2 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC34.24■■■■□ 3.07
SNAPC4Q5SXM2 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
SNAPC4Q5SXM2 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC34.24■■■■□ 3.07
SNAPC4Q5SXM2 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
SNAPC4Q5SXM2 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC34.24■■■■□ 3.07
SNAPC4Q5SXM2 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
SNAPC4Q5SXM2 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
SNAPC4Q5SXM2 WDR88-203ENST00000592765 651 ntTSL 5 BASIC34.23■■■■□ 3.07
SNAPC4Q5SXM2 AC145285.6-201ENST00000604632 637 ntBASIC34.23■■■■□ 3.07
SNAPC4Q5SXM2 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
SNAPC4Q5SXM2 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
SNAPC4Q5SXM2 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
SNAPC4Q5SXM2 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC34.22■■■■□ 3.07
SNAPC4Q5SXM2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC34.22■■■■□ 3.07
SNAPC4Q5SXM2 SERP1-205ENST00000487153 657 ntTSL 4 BASIC34.22■■■■□ 3.07
SNAPC4Q5SXM2 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC34.22■■■■□ 3.07
SNAPC4Q5SXM2 TPM1-226ENST00000560959 925 ntTSL 2 BASIC34.22■■■■□ 3.07
SNAPC4Q5SXM2 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
SNAPC4Q5SXM2 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
SNAPC4Q5SXM2 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC34.21■■■■□ 3.07
SNAPC4Q5SXM2 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC34.21■■■■□ 3.07
SNAPC4Q5SXM2 AL590326.2-201ENST00000625139 305 ntBASIC34.21■■■■□ 3.07
SNAPC4Q5SXM2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
SNAPC4Q5SXM2 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC34.2■■■■□ 3.07
SNAPC4Q5SXM2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC34.2■■■■□ 3.06
SNAPC4Q5SXM2 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC34.2■■■■□ 3.06
SNAPC4Q5SXM2 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.06
SNAPC4Q5SXM2 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC34.2■■■■□ 3.06
SNAPC4Q5SXM2 AC005829.2-201ENST00000571422 1056 ntBASIC34.2■■■■□ 3.06
SNAPC4Q5SXM2 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC34.2■■■■□ 3.06
SNAPC4Q5SXM2 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC34.2■■■■□ 3.06
SNAPC4Q5SXM2 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC34.19■■■■□ 3.06
SNAPC4Q5SXM2 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC34.19■■■■□ 3.06
SNAPC4Q5SXM2 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC34.19■■■■□ 3.06
SNAPC4Q5SXM2 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC34.19■■■■□ 3.06
SNAPC4Q5SXM2 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC34.19■■■■□ 3.06
SNAPC4Q5SXM2 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC34.19■■■■□ 3.06
SNAPC4Q5SXM2 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC34.19■■■■□ 3.06
SNAPC4Q5SXM2 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC34.18■■■■□ 3.06
SNAPC4Q5SXM2 MMP23A-201ENST00000234610 1017 ntBASIC34.18■■■■□ 3.06
SNAPC4Q5SXM2 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC34.18■■■■□ 3.06
SNAPC4Q5SXM2 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC34.18■■■■□ 3.06
SNAPC4Q5SXM2 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC34.18■■■■□ 3.06
SNAPC4Q5SXM2 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
SNAPC4Q5SXM2 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
SNAPC4Q5SXM2 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
SNAPC4Q5SXM2 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC34.17■■■■□ 3.06
SNAPC4Q5SXM2 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC34.17■■■■□ 3.06
SNAPC4Q5SXM2 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC34.17■■■■□ 3.06
SNAPC4Q5SXM2 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC34.17■■■■□ 3.06
SNAPC4Q5SXM2 KRT8P9-201ENST00000558927 1449 ntBASIC34.17■■■■□ 3.06
SNAPC4Q5SXM2 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC34.17■■■■□ 3.06
SNAPC4Q5SXM2 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC34.16■■■■□ 3.06
SNAPC4Q5SXM2 NFE2L3P1-201ENST00000588207 1959 ntBASIC34.16■■■■□ 3.06
SNAPC4Q5SXM2 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC34.16■■■■□ 3.06
SNAPC4Q5SXM2 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC34.16■■■■□ 3.06
SNAPC4Q5SXM2 RBM42-202ENST00000586618 771 ntTSL 3 BASIC34.16■■■■□ 3.06
SNAPC4Q5SXM2 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC34.16■■■■□ 3.06
SNAPC4Q5SXM2 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC34.16■■■■□ 3.06
SNAPC4Q5SXM2 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
SNAPC4Q5SXM2 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
SNAPC4Q5SXM2 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC34.16■■■■□ 3.06
SNAPC4Q5SXM2 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC34.15■■■■□ 3.06
SNAPC4Q5SXM2 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
SNAPC4Q5SXM2 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
SNAPC4Q5SXM2 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC34.15■■■■□ 3.06
SNAPC4Q5SXM2 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC34.15■■■■□ 3.06
SNAPC4Q5SXM2 NME3-204ENST00000563498 920 ntTSL 2 BASIC34.15■■■■□ 3.06
SNAPC4Q5SXM2 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC34.15■■■■□ 3.06
SNAPC4Q5SXM2 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC34.15■■■■□ 3.06
SNAPC4Q5SXM2 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC34.15■■■■□ 3.06
SNAPC4Q5SXM2 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
SNAPC4Q5SXM2 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC34.14■■■■□ 3.06
SNAPC4Q5SXM2 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC34.14■■■■□ 3.06
SNAPC4Q5SXM2 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
SNAPC4Q5SXM2 RMI2-205ENST00000576027 818 ntTSL 2 BASIC34.14■■■■□ 3.06
SNAPC4Q5SXM2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC34.14■■■■□ 3.06
SNAPC4Q5SXM2 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC34.14■■■■□ 3.06
SNAPC4Q5SXM2 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
SNAPC4Q5SXM2 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC34.14■■■■□ 3.06
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms