Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.88■□□□□ 0.93
CDH17Q12864 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.88■□□□□ 0.93
CDH17Q12864 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH17Q12864 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDH17Q12864 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH17Q12864 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDH17Q12864 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH17Q12864 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CDH17Q12864 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH17Q12864 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
CDH17Q12864 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDH17Q12864 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.87■□□□□ 0.93
CDH17Q12864 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH17Q12864 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CDH17Q12864 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CDH17Q12864 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH17Q12864 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.87■□□□□ 0.93
CDH17Q12864 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH17Q12864 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.87■□□□□ 0.93
CDH17Q12864 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CDH17Q12864 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH17Q12864 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH17Q12864 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.87■□□□□ 0.93
CDH17Q12864 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH17Q12864 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH17Q12864 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CDH17Q12864 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH17Q12864 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDH17Q12864 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.87■□□□□ 0.93
CDH17Q12864 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.87■□□□□ 0.93
CDH17Q12864 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH17Q12864 LINC01006-201ENST00000333319 2292 ntBASIC20.87■□□□□ 0.93
CDH17Q12864 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH17Q12864 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH17Q12864 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH17Q12864 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CDH17Q12864 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CDH17Q12864 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH17Q12864 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH17Q12864 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
CDH17Q12864 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH17Q12864 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDH17Q12864 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDH17Q12864 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.86■□□□□ 0.93
CDH17Q12864 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.85■□□□□ 0.93
CDH17Q12864 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDH17Q12864 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDH17Q12864 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDH17Q12864 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDH17Q12864 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDH17Q12864 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDH17Q12864 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDH17Q12864 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDH17Q12864 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDH17Q12864 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CDH17Q12864 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDH17Q12864 SLC7A5P1-201ENST00000568957 537 ntBASIC20.85■□□□□ 0.93
CDH17Q12864 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.85■□□□□ 0.93
CDH17Q12864 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.85■□□□□ 0.93
CDH17Q12864 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CDH17Q12864 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDH17Q12864 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.85■□□□□ 0.93
CDH17Q12864 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
CDH17Q12864 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDH17Q12864 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.84■□□□□ 0.93
CDH17Q12864 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH17Q12864 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.84■□□□□ 0.93
CDH17Q12864 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH17Q12864 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH17Q12864 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH17Q12864 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH17Q12864 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH17Q12864 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDH17Q12864 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CDH17Q12864 AC097381.1-201ENST00000429019 1296 ntBASIC20.84■□□□□ 0.93
CDH17Q12864 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.84■□□□□ 0.93
CDH17Q12864 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.84■□□□□ 0.93
CDH17Q12864 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH17Q12864 KRT18P61-201ENST00000585825 1298 ntBASIC20.84■□□□□ 0.93
CDH17Q12864 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.84■□□□□ 0.93
CDH17Q12864 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.84■□□□□ 0.93
CDH17Q12864 AP005212.1-201ENST00000581547 1997 ntBASIC20.84■□□□□ 0.93
CDH17Q12864 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH17Q12864 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CDH17Q12864 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.84■□□□□ 0.93
CDH17Q12864 FP700111.2-201ENST00000619190 1892 ntBASIC20.84■□□□□ 0.93
CDH17Q12864 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CDH17Q12864 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.83■□□□□ 0.93
CDH17Q12864 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDH17Q12864 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDH17Q12864 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.83■□□□□ 0.93
CDH17Q12864 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.83■□□□□ 0.93
CDH17Q12864 AC034268.1-201ENST00000441047 882 ntBASIC20.83■□□□□ 0.93
CDH17Q12864 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.83■□□□□ 0.93
CDH17Q12864 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDH17Q12864 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CDH17Q12864 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDH17Q12864 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.83■□□□□ 0.92
CDH17Q12864 GABARAPL3-202ENST00000624044 1851 ntBASIC20.83■□□□□ 0.92
CDH17Q12864 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms