Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CFHR3Q02985 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.19■□□□□ 0.18
CFHR3Q02985 AC093787.1-201ENST00000450396 207 ntBASIC16.19■□□□□ 0.18
CFHR3Q02985 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CFHR3Q02985 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CFHR3Q02985 AC105036.2-201ENST00000569468 176 ntBASIC16.19■□□□□ 0.18
CFHR3Q02985 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.19■□□□□ 0.18
CFHR3Q02985 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CFHR3Q02985 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CFHR3Q02985 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
CFHR3Q02985 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CFHR3Q02985 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CFHR3Q02985 AL024507.2-201ENST00000606070 2574 ntBASIC16.19■□□□□ 0.18
CFHR3Q02985 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.19■□□□□ 0.18
CFHR3Q02985 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CFHR3Q02985 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CFHR3Q02985 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.18■□□□□ 0.18
CFHR3Q02985 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFHR3Q02985 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFHR3Q02985 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CFHR3Q02985 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFHR3Q02985 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFHR3Q02985 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CFHR3Q02985 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CFHR3Q02985 AC007322.3-201ENST00000426526 701 ntBASIC16.18■□□□□ 0.18
CFHR3Q02985 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFHR3Q02985 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
CFHR3Q02985 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.18■□□□□ 0.18
CFHR3Q02985 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.18■□□□□ 0.18
CFHR3Q02985 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.18■□□□□ 0.18
CFHR3Q02985 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CFHR3Q02985 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFHR3Q02985 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CFHR3Q02985 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.18■□□□□ 0.18
CFHR3Q02985 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CFHR3Q02985 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CFHR3Q02985 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CFHR3Q02985 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFHR3Q02985 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CFHR3Q02985 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFHR3Q02985 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFHR3Q02985 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFHR3Q02985 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CFHR3Q02985 AC116050.2-201ENST00000612102 1779 ntBASIC16.18■□□□□ 0.18
CFHR3Q02985 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFHR3Q02985 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.18■□□□□ 0.18
CFHR3Q02985 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
CFHR3Q02985 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFHR3Q02985 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
CFHR3Q02985 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CFHR3Q02985 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.17■□□□□ 0.18
CFHR3Q02985 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFHR3Q02985 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CFHR3Q02985 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFHR3Q02985 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFHR3Q02985 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CFHR3Q02985 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CFHR3Q02985 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.17■□□□□ 0.18
CFHR3Q02985 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.17■□□□□ 0.18
CFHR3Q02985 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CFHR3Q02985 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CFHR3Q02985 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFHR3Q02985 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
CFHR3Q02985 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.17■□□□□ 0.18
CFHR3Q02985 FEM1AP4-201ENST00000443167 1987 ntBASIC16.17■□□□□ 0.18
CFHR3Q02985 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CFHR3Q02985 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CFHR3Q02985 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CFHR3Q02985 AL049796.1-201ENST00000565336 1766 ntBASIC16.16■□□□□ 0.18
CFHR3Q02985 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
CFHR3Q02985 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
CFHR3Q02985 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.16■□□□□ 0.18
CFHR3Q02985 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CFHR3Q02985 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CFHR3Q02985 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
CFHR3Q02985 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.16■□□□□ 0.18
CFHR3Q02985 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
CFHR3Q02985 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.16■□□□□ 0.18
CFHR3Q02985 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CFHR3Q02985 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CFHR3Q02985 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CFHR3Q02985 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
CFHR3Q02985 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CFHR3Q02985 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CFHR3Q02985 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CFHR3Q02985 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC16.15■□□□□ 0.18
CFHR3Q02985 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CFHR3Q02985 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CFHR3Q02985 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.15■□□□□ 0.18
CFHR3Q02985 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.15■□□□□ 0.18
CFHR3Q02985 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CFHR3Q02985 AC142086.2-201ENST00000569753 217 ntBASIC16.15■□□□□ 0.18
CFHR3Q02985 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.15■□□□□ 0.18
CFHR3Q02985 AC010980.2-201ENST00000587099 1412 ntBASIC16.15■□□□□ 0.18
CFHR3Q02985 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.15■□□□□ 0.18
CFHR3Q02985 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
CFHR3Q02985 AC100791.3-201ENST00000617619 330 ntBASIC16.15■□□□□ 0.18
CFHR3Q02985 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CFHR3Q02985 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC16.15■□□□□ 0.18
CFHR3Q02985 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms