Protein–RNA interactions for Protein: P61165

TMEM258, Transmembrane protein 258, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258P61165 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC12.48□□□□□ -0.41
TMEM258P61165 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM258P61165 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM258P61165 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM258P61165 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
TMEM258P61165 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM258P61165 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM258P61165 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM258P61165 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
TMEM258P61165 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM258P61165 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM258P61165 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM258P61165 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
TMEM258P61165 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
TMEM258P61165 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM258P61165 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
TMEM258P61165 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM258P61165 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
TMEM258P61165 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM258P61165 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM258P61165 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM258P61165 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC12.47□□□□□ -0.41
TMEM258P61165 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC12.47□□□□□ -0.41
TMEM258P61165 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
TMEM258P61165 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM258P61165 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM258P61165 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
TMEM258P61165 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC12.47□□□□□ -0.41
TMEM258P61165 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM258P61165 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM258P61165 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM258P61165 AC068587.6-202ENST00000641839 5619 ntBASIC12.47□□□□□ -0.41
TMEM258P61165 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM258P61165 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM258P61165 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM258P61165 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM258P61165 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM258P61165 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
TMEM258P61165 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM258P61165 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM258P61165 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
TMEM258P61165 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM258P61165 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM258P61165 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM258P61165 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM258P61165 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM258P61165 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
TMEM258P61165 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
TMEM258P61165 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
TMEM258P61165 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TMEM258P61165 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TMEM258P61165 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
TMEM258P61165 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
TMEM258P61165 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC12.46□□□□□ -0.42
TMEM258P61165 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
TMEM258P61165 TK2-221ENST00000620035 5060 ntTSL 2 BASIC12.46□□□□□ -0.42
TMEM258P61165 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
TMEM258P61165 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TMEM258P61165 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM258P61165 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM258P61165 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM258P61165 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC12.45□□□□□ -0.42
TMEM258P61165 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC12.45□□□□□ -0.42
TMEM258P61165 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM258P61165 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM258P61165 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM258P61165 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM258P61165 LINC01126-201ENST00000623515 1646 ntBASIC12.45□□□□□ -0.42
TMEM258P61165 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC12.45□□□□□ -0.42
TMEM258P61165 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM258P61165 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM258P61165 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
TMEM258P61165 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC12.45□□□□□ -0.42
TMEM258P61165 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC12.45□□□□□ -0.42
TMEM258P61165 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC12.45□□□□□ -0.42
TMEM258P61165 AC139713.2-201ENST00000641328 2723 ntBASIC12.45□□□□□ -0.42
TMEM258P61165 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM258P61165 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM258P61165 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM258P61165 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM258P61165 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM258P61165 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
TMEM258P61165 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
TMEM258P61165 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
TMEM258P61165 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM258P61165 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC12.44□□□□□ -0.42
TMEM258P61165 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM258P61165 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC12.44□□□□□ -0.42
TMEM258P61165 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM258P61165 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM258P61165 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM258P61165 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC12.44□□□□□ -0.42
TMEM258P61165 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM258P61165 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM258P61165 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
TMEM258P61165 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC12.44□□□□□ -0.42
TMEM258P61165 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
TMEM258P61165 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM258P61165 MEST-211ENST00000437945 1455 ntTSL 5 BASIC12.44□□□□□ -0.42
TMEM258P61165 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms