Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RIPPLY3P57055 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RIPPLY3P57055 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RIPPLY3P57055 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RIPPLY3P57055 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RIPPLY3P57055 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RIPPLY3P57055 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RIPPLY3P57055 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RIPPLY3P57055 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RIPPLY3P57055 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RIPPLY3P57055 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RIPPLY3P57055 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RIPPLY3P57055 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RIPPLY3P57055 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.13■□□□□ 0.33
RIPPLY3P57055 SLC25A3P1-201ENST00000443844 931 ntBASIC17.13■□□□□ 0.33
RIPPLY3P57055 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RIPPLY3P57055 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RIPPLY3P57055 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.13■□□□□ 0.33
RIPPLY3P57055 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.13■□□□□ 0.33
RIPPLY3P57055 MTDHP1-201ENST00000605323 784 ntBASIC17.13■□□□□ 0.33
RIPPLY3P57055 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.13■□□□□ 0.33
RIPPLY3P57055 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RIPPLY3P57055 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RIPPLY3P57055 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.13■□□□□ 0.33
RIPPLY3P57055 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RIPPLY3P57055 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RIPPLY3P57055 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RIPPLY3P57055 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RIPPLY3P57055 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RIPPLY3P57055 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RIPPLY3P57055 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RIPPLY3P57055 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.12■□□□□ 0.33
RIPPLY3P57055 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.12■□□□□ 0.33
RIPPLY3P57055 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.12■□□□□ 0.33
RIPPLY3P57055 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.12■□□□□ 0.33
RIPPLY3P57055 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RIPPLY3P57055 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
RIPPLY3P57055 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
RIPPLY3P57055 AP000550.4-202ENST00000639755 178 ntBASIC17.12■□□□□ 0.33
RIPPLY3P57055 AL023875.1-201ENST00000640777 796 ntBASIC17.12■□□□□ 0.33
RIPPLY3P57055 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC17.12■□□□□ 0.33
RIPPLY3P57055 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RIPPLY3P57055 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.12■□□□□ 0.33
RIPPLY3P57055 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RIPPLY3P57055 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC17.11■□□□□ 0.33
RIPPLY3P57055 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RIPPLY3P57055 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RIPPLY3P57055 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
RIPPLY3P57055 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.11■□□□□ 0.33
RIPPLY3P57055 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RIPPLY3P57055 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RIPPLY3P57055 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.11■□□□□ 0.33
RIPPLY3P57055 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.11■□□□□ 0.33
RIPPLY3P57055 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.11■□□□□ 0.33
RIPPLY3P57055 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RIPPLY3P57055 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.11■□□□□ 0.33
RIPPLY3P57055 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RIPPLY3P57055 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RIPPLY3P57055 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RIPPLY3P57055 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RIPPLY3P57055 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC17.11■□□□□ 0.33
RIPPLY3P57055 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RIPPLY3P57055 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.1■□□□□ 0.33
RIPPLY3P57055 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.1■□□□□ 0.33
RIPPLY3P57055 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RIPPLY3P57055 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
RIPPLY3P57055 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
RIPPLY3P57055 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC17.1■□□□□ 0.33
RIPPLY3P57055 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
RIPPLY3P57055 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.1■□□□□ 0.33
RIPPLY3P57055 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
RIPPLY3P57055 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RIPPLY3P57055 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RIPPLY3P57055 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RIPPLY3P57055 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RIPPLY3P57055 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RIPPLY3P57055 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.1■□□□□ 0.33
RIPPLY3P57055 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.1■□□□□ 0.33
RIPPLY3P57055 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.1■□□□□ 0.33
RIPPLY3P57055 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC17.1■□□□□ 0.33
RIPPLY3P57055 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RIPPLY3P57055 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.1■□□□□ 0.33
RIPPLY3P57055 AC120498.10-201ENST00000621827 505 ntBASIC17.1■□□□□ 0.33
RIPPLY3P57055 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RIPPLY3P57055 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC17.1■□□□□ 0.33
RIPPLY3P57055 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC17.1■□□□□ 0.33
RIPPLY3P57055 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RIPPLY3P57055 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RIPPLY3P57055 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC17.09■□□□□ 0.33
RIPPLY3P57055 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.09■□□□□ 0.33
RIPPLY3P57055 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RIPPLY3P57055 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RIPPLY3P57055 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.09■□□□□ 0.33
RIPPLY3P57055 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.09■□□□□ 0.33
RIPPLY3P57055 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RIPPLY3P57055 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.09■□□□□ 0.33
RIPPLY3P57055 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.09■□□□□ 0.33
RIPPLY3P57055 AP000347.1-202ENST00000435868 847 ntBASIC17.09■□□□□ 0.33
RIPPLY3P57055 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
RIPPLY3P57055 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms