Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PER3P56645 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PER3P56645 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.05■□□□□ 0.64
PER3P56645 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.05■□□□□ 0.64
PER3P56645 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PER3P56645 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PER3P56645 AC055733.4-201ENST00000638462 1354 ntBASIC19.05■□□□□ 0.64
PER3P56645 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PER3P56645 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PER3P56645 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.05■□□□□ 0.64
PER3P56645 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.05■□□□□ 0.64
PER3P56645 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PER3P56645 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.04■□□□□ 0.64
PER3P56645 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.04■□□□□ 0.64
PER3P56645 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PER3P56645 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PER3P56645 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PER3P56645 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.04■□□□□ 0.64
PER3P56645 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.04■□□□□ 0.64
PER3P56645 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PER3P56645 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.04■□□□□ 0.64
PER3P56645 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.04■□□□□ 0.64
PER3P56645 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.04■□□□□ 0.64
PER3P56645 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PER3P56645 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
PER3P56645 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.04■□□□□ 0.64
PER3P56645 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PER3P56645 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.03■□□□□ 0.64
PER3P56645 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PER3P56645 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PER3P56645 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PER3P56645 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PER3P56645 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PER3P56645 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PER3P56645 AC007322.4-201ENST00000509611 723 ntBASIC19.03■□□□□ 0.64
PER3P56645 RARRES2P4-201ENST00000514074 484 ntBASIC19.03■□□□□ 0.64
PER3P56645 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.03■□□□□ 0.64
PER3P56645 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PER3P56645 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.03■□□□□ 0.64
PER3P56645 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PER3P56645 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PER3P56645 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PER3P56645 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PER3P56645 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PER3P56645 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
PER3P56645 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
PER3P56645 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PER3P56645 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
PER3P56645 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.03■□□□□ 0.64
PER3P56645 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PER3P56645 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PER3P56645 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PER3P56645 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.02■□□□□ 0.64
PER3P56645 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
PER3P56645 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PER3P56645 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.02■□□□□ 0.64
PER3P56645 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PER3P56645 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PER3P56645 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PER3P56645 DUSP5P2-201ENST00000426873 1033 ntBASIC19.02■□□□□ 0.64
PER3P56645 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
PER3P56645 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.02■□□□□ 0.64
PER3P56645 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
PER3P56645 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PER3P56645 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.02■□□□□ 0.64
PER3P56645 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
PER3P56645 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PER3P56645 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.02■□□□□ 0.64
PER3P56645 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.02■□□□□ 0.64
PER3P56645 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PER3P56645 AL391422.3-201ENST00000603791 2761 ntBASIC19.02■□□□□ 0.63
PER3P56645 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
PER3P56645 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.02■□□□□ 0.63
PER3P56645 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.02■□□□□ 0.63
PER3P56645 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PER3P56645 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PER3P56645 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PER3P56645 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PER3P56645 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PER3P56645 AIRN-201ENST00000601203 4374 ntBASIC19.01■□□□□ 0.63
PER3P56645 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PER3P56645 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
PER3P56645 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PER3P56645 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.01■□□□□ 0.63
PER3P56645 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PER3P56645 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PER3P56645 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.01■□□□□ 0.63
PER3P56645 AL512625.2-201ENST00000417533 625 ntBASIC19.01■□□□□ 0.63
PER3P56645 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.01■□□□□ 0.63
PER3P56645 RPS2P52-201ENST00000469610 820 ntBASIC19.01■□□□□ 0.63
PER3P56645 AC097658.1-201ENST00000475555 843 ntBASIC19.01■□□□□ 0.63
PER3P56645 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.01■□□□□ 0.63
PER3P56645 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.01■□□□□ 0.63
PER3P56645 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.01■□□□□ 0.63
PER3P56645 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.01■□□□□ 0.63
PER3P56645 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
PER3P56645 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PER3P56645 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
PER3P56645 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PER3P56645 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms