Protein–RNA interactions for Protein: P48995

TRPC1, Short transient receptor potential channel 1, humanhuman

Predictions only

Length 793 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPC1P48995 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRPC1P48995 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRPC1P48995 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRPC1P48995 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
TRPC1P48995 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRPC1P48995 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
TRPC1P48995 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.83■□□□□ 0.77
TRPC1P48995 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRPC1P48995 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRPC1P48995 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.83■□□□□ 0.77
TRPC1P48995 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRPC1P48995 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRPC1P48995 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRPC1P48995 LINC01006-201ENST00000333319 2292 ntBASIC19.83■□□□□ 0.76
TRPC1P48995 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.83■□□□□ 0.76
TRPC1P48995 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.83■□□□□ 0.76
TRPC1P48995 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRPC1P48995 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
TRPC1P48995 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRPC1P48995 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRPC1P48995 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.82■□□□□ 0.76
TRPC1P48995 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.82■□□□□ 0.76
TRPC1P48995 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.82■□□□□ 0.76
TRPC1P48995 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.82■□□□□ 0.76
TRPC1P48995 AL354811.1-201ENST00000610286 706 ntBASIC19.82■□□□□ 0.76
TRPC1P48995 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRPC1P48995 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TRPC1P48995 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRPC1P48995 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRPC1P48995 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRPC1P48995 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRPC1P48995 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.82■□□□□ 0.76
TRPC1P48995 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
TRPC1P48995 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TRPC1P48995 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRPC1P48995 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.82■□□□□ 0.76
TRPC1P48995 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRPC1P48995 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRPC1P48995 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRPC1P48995 AC055733.4-201ENST00000638462 1354 ntBASIC19.82■□□□□ 0.76
TRPC1P48995 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRPC1P48995 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
TRPC1P48995 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
TRPC1P48995 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRPC1P48995 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
TRPC1P48995 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRPC1P48995 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRPC1P48995 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
TRPC1P48995 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.81■□□□□ 0.76
TRPC1P48995 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRPC1P48995 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.81■□□□□ 0.76
TRPC1P48995 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRPC1P48995 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.81■□□□□ 0.76
TRPC1P48995 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.81■□□□□ 0.76
TRPC1P48995 YBX1P1-201ENST00000445822 960 ntBASIC19.81■□□□□ 0.76
TRPC1P48995 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.81■□□□□ 0.76
TRPC1P48995 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.81■□□□□ 0.76
TRPC1P48995 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRPC1P48995 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRPC1P48995 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.81■□□□□ 0.76
TRPC1P48995 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.81■□□□□ 0.76
TRPC1P48995 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRPC1P48995 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRPC1P48995 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRPC1P48995 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRPC1P48995 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRPC1P48995 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRPC1P48995 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRPC1P48995 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TRPC1P48995 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRPC1P48995 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRPC1P48995 AC092666.2-201ENST00000613287 246 ntBASIC19.8■□□□□ 0.76
TRPC1P48995 PLK5-205ENST00000642079 1969 ntBASIC19.8■□□□□ 0.76
TRPC1P48995 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRPC1P48995 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRPC1P48995 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRPC1P48995 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRPC1P48995 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRPC1P48995 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRPC1P48995 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TRPC1P48995 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.8■□□□□ 0.76
TRPC1P48995 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRPC1P48995 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRPC1P48995 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRPC1P48995 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.79■□□□□ 0.76
TRPC1P48995 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TRPC1P48995 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
TRPC1P48995 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TRPC1P48995 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.79■□□□□ 0.76
TRPC1P48995 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRPC1P48995 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRPC1P48995 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.79■□□□□ 0.76
TRPC1P48995 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRPC1P48995 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRPC1P48995 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRPC1P48995 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRPC1P48995 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRPC1P48995 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.79■□□□□ 0.76
TRPC1P48995 AL162430.1-201ENST00000480705 870 ntBASIC19.79■□□□□ 0.76
TRPC1P48995 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms