Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A6P48664 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A6P48664 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SLC1A6P48664 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A6P48664 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SLC1A6P48664 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC1A6P48664 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SLC1A6P48664 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.31■□□□□ 0.84
SLC1A6P48664 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.31■□□□□ 0.84
SLC1A6P48664 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A6P48664 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A6P48664 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A6P48664 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.31■□□□□ 0.84
SLC1A6P48664 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A6P48664 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A6P48664 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A6P48664 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A6P48664 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A6P48664 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A6P48664 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A6P48664 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SLC1A6P48664 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.3■□□□□ 0.84
SLC1A6P48664 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.3■□□□□ 0.84
SLC1A6P48664 BX842568.3-201ENST00000418104 571 ntBASIC20.3■□□□□ 0.84
SLC1A6P48664 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A6P48664 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A6P48664 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A6P48664 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SLC1A6P48664 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC1A6P48664 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A6P48664 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC1A6P48664 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A6P48664 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A6P48664 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A6P48664 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A6P48664 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A6P48664 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC1A6P48664 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC1A6P48664 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC1A6P48664 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC1A6P48664 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC1A6P48664 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.29■□□□□ 0.84
SLC1A6P48664 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC1A6P48664 AC011484.1-201ENST00000377652 1995 ntBASIC20.29■□□□□ 0.84
SLC1A6P48664 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.29■□□□□ 0.84
SLC1A6P48664 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC1A6P48664 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.29■□□□□ 0.84
SLC1A6P48664 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC1A6P48664 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
SLC1A6P48664 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.29■□□□□ 0.84
SLC1A6P48664 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC1A6P48664 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.29■□□□□ 0.84
SLC1A6P48664 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC1A6P48664 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.29■□□□□ 0.84
SLC1A6P48664 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC1A6P48664 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.29■□□□□ 0.84
SLC1A6P48664 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SLC1A6P48664 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SLC1A6P48664 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC1A6P48664 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SLC1A6P48664 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC1A6P48664 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SLC1A6P48664 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SLC1A6P48664 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC1A6P48664 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC1A6P48664 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.28■□□□□ 0.84
SLC1A6P48664 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.28■□□□□ 0.84
SLC1A6P48664 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.28■□□□□ 0.84
SLC1A6P48664 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.28■□□□□ 0.84
SLC1A6P48664 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC1A6P48664 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.28■□□□□ 0.84
SLC1A6P48664 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.28■□□□□ 0.84
SLC1A6P48664 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
SLC1A6P48664 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.28■□□□□ 0.84
SLC1A6P48664 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SLC1A6P48664 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC1A6P48664 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SLC1A6P48664 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC1A6P48664 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
SLC1A6P48664 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SLC1A6P48664 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SLC1A6P48664 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC1A6P48664 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC1A6P48664 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC1A6P48664 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC1A6P48664 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SLC1A6P48664 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC1A6P48664 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC1A6P48664 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SLC1A6P48664 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC1A6P48664 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SLC1A6P48664 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.27■□□□□ 0.84
SLC1A6P48664 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SLC1A6P48664 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.27■□□□□ 0.84
SLC1A6P48664 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.27■□□□□ 0.84
SLC1A6P48664 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.27■□□□□ 0.84
SLC1A6P48664 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.27■□□□□ 0.84
SLC1A6P48664 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.27■□□□□ 0.84
SLC1A6P48664 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
SLC1A6P48664 AC005224.4-201ENST00000583262 1652 ntBASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms