Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 YBR013CYBR013C 390 nt1.2□□□□□ -2.22
VPS55P47111 CDC31YOR257W 486 nt1.2□□□□□ -2.22
VPS55P47111 MED8YBR193C 672 nt1.2□□□□□ -2.22
VPS55P47111 SSP1YHR184W 1716 nt1.2□□□□□ -2.22
VPS55P47111 YBP1YBR216C 2025 nt1.2□□□□□ -2.22
VPS55P47111 KAR5YMR065W 1515 nt1.2□□□□□ -2.22
VPS55P47111 POM152YMR129W 4014 nt1.19□□□□□ -2.22
VPS55P47111 YEL1YBL060W 2064 nt1.19□□□□□ -2.22
VPS55P47111 VPS16YPL045W 2397 nt1.19□□□□□ -2.22
VPS55P47111 YGR109W-BYGR109W-B 4644 nt1.19□□□□□ -2.22
VPS55P47111 FMN1YDR236C 657 nt1.19□□□□□ -2.22
VPS55P47111 AI5_BETAQ0075 1065 nt1.19□□□□□ -2.22
VPS55P47111 PLM2YDR501W 1566 nt1.19□□□□□ -2.22
VPS55P47111 PGD1YGL025C 1194 nt1.19□□□□□ -2.22
VPS55P47111 YHR073W-AYHR073W-A 177 nt1.19□□□□□ -2.22
VPS55P47111 MMF1YIL051C 438 nt1.19□□□□□ -2.22
VPS55P47111 YML084WYML084W 309 nt1.19□□□□□ -2.22
VPS55P47111 YOR203WYOR203W 354 nt1.19□□□□□ -2.22
VPS55P47111 SAR1YPL218W 573 nt1.19□□□□□ -2.22
VPS55P47111 POL4YCR014C 1749 nt1.18□□□□□ -2.22
VPS55P47111 TDA9YML081W 3756 nt1.18□□□□□ -2.22
VPS55P47111 HER1YOR227W 3741 nt1.18□□□□□ -2.22
VPS55P47111 YCR099CYCR099C 468 nt1.18□□□□□ -2.22
VPS55P47111 YGR190CYGR190C 366 nt1.18□□□□□ -2.22
VPS55P47111 YJL147CYJL147C 1149 nt1.18□□□□□ -2.22
VPS55P47111 PFD1YJL179W 330 nt1.18□□□□□ -2.22
VPS55P47111 SPO20YMR017W 1194 nt1.18□□□□□ -2.22
VPS55P47111 RGM1YMR182C 636 nt1.18□□□□□ -2.22
VPS55P47111 MRPL24YMR193W 777 nt1.18□□□□□ -2.22
VPS55P47111 VTI1YMR197C 654 nt1.18□□□□□ -2.22
VPS55P47111 RPS10AYOR293W 318 nt1.18□□□□□ -2.22
VPS55P47111 APA1YCL050C 966 nt1.18□□□□□ -2.22
VPS55P47111 FYV8YGR196C 2454 nt1.18□□□□□ -2.22
VPS55P47111 YLR419WYLR419W 4308 nt1.18□□□□□ -2.22
VPS55P47111 SBE22YHR103W 2559 nt1.18□□□□□ -2.22
VPS55P47111 PUF4YGL014W 2667 nt1.18□□□□□ -2.22
VPS55P47111 MAL33YBR297W 1407 nt1.17□□□□□ -2.22
VPS55P47111 RRG1YDR065W 1098 nt1.17□□□□□ -2.22
VPS55P47111 TCA17YEL048C 459 nt1.17□□□□□ -2.22
VPS55P47111 YFL015CYFL015C 495 nt1.17□□□□□ -2.22
VPS55P47111 SAE2YGL175C 1038 nt1.17□□□□□ -2.22
VPS55P47111 RPF2YKR081C 1035 nt1.17□□□□□ -2.22
VPS55P47111 LSM2YBL026W 288 nt1.17□□□□□ -2.22
VPS55P47111 SRL1YOR247W 633 nt1.17□□□□□ -2.22
VPS55P47111 PMD1YER132C 5262 nt1.17□□□□□ -2.22
VPS55P47111 NUF2YOL069W 1356 nt1.17□□□□□ -2.22
VPS55P47111 MSH6YDR097C 3729 nt1.17□□□□□ -2.22
VPS55P47111 YGL014C-AYGL014C-A 162 nt1.16□□□□□ -2.22
VPS55P47111 RPL11BYGR085C 525 nt1.16□□□□□ -2.22
VPS55P47111 tQ(UUG)E2tQ(UUG)E2 72 nt1.16□□□□□ -2.22
VPS55P47111 AIM23YJL131C 1071 nt1.16□□□□□ -2.22
VPS55P47111 RPA34YJL148W 702 nt1.16□□□□□ -2.22
VPS55P47111 NYV1YLR093C 762 nt1.16□□□□□ -2.22
VPS55P47111 YLR379WYLR379W 375 nt1.16□□□□□ -2.22
VPS55P47111 PDP3YLR455W 915 nt1.16□□□□□ -2.22
VPS55P47111 RPL11AYPR102C 525 nt1.16□□□□□ -2.22
VPS55P47111 GRX1YCL035C 333 nt1.16□□□□□ -2.22
VPS55P47111 GNT1YOR320C 1476 nt1.16□□□□□ -2.22
VPS55P47111 VPH1YOR270C 2523 nt1.15□□□□□ -2.23
VPS55P47111 YFR010W-AYFR010W-A 189 nt1.15□□□□□ -2.23
VPS55P47111 DSE2YHR143W 978 nt1.15□□□□□ -2.23
VPS55P47111 YMR181CYMR181C 465 nt1.15□□□□□ -2.23
VPS55P47111 SLY41YOR307C 1362 nt1.15□□□□□ -2.23
VPS55P47111 YHL012WYHL012W 1482 nt1.15□□□□□ -2.23
VPS55P47111 VPS35YJL154C 2835 nt1.15□□□□□ -2.23
VPS55P47111 ARK1YNL020C 1917 nt1.15□□□□□ -2.23
VPS55P47111 PCL2YDL127W 927 nt1.14□□□□□ -2.23
VPS55P47111 YDL163WYDL163W 303 nt1.14□□□□□ -2.23
VPS55P47111 ECM11YDR446W 909 nt1.14□□□□□ -2.23
VPS55P47111 YIL156W-AYIL156W-A 402 nt1.14□□□□□ -2.23
VPS55P47111 CTP1YBR291C 900 nt1.14□□□□□ -2.23
VPS55P47111 DOT6YER088C 2013 nt1.14□□□□□ -2.23
VPS55P47111 RIT1YMR283C 1542 nt1.14□□□□□ -2.23
VPS55P47111 CAT2YML042W 2013 nt1.13□□□□□ -2.23
VPS55P47111 MSH3YCR092C 3057 nt1.13□□□□□ -2.23
VPS55P47111 IRA1YBR140C 9279 nt1.13□□□□□ -2.23
VPS55P47111 YDR320W-BYDR320W-B 138 nt1.13□□□□□ -2.23
VPS55P47111 COBQ0105 1158 nt1.13□□□□□ -2.23
VPS55P47111 RGI2YIL057C 495 nt1.13□□□□□ -2.23
VPS55P47111 TPM2YIL138C 486 nt1.13□□□□□ -2.23
VPS55P47111 YAL069WYAL069W 315 nt1.13□□□□□ -2.23
VPS55P47111 LCL2YLR104W 396 nt1.13□□□□□ -2.23
VPS55P47111 CSH1YBR161W 1131 nt1.13□□□□□ -2.23
VPS55P47111 DPB3YBR278W 606 nt1.13□□□□□ -2.23
VPS55P47111 WHI3YNL197C 1986 nt1.13□□□□□ -2.23
VPS55P47111 MON2YNL297C 4911 nt1.13□□□□□ -2.23
VPS55P47111 CTF4YPR135W 2784 nt1.13□□□□□ -2.23
VPS55P47111 HCS1YKL017C 2052 nt1.12□□□□□ -2.23
VPS55P47111 SEY1YOR165W 2331 nt1.12□□□□□ -2.23
VPS55P47111 RRP6YOR001W 2202 nt1.12□□□□□ -2.23
VPS55P47111 YOR343W-BYOR343W-B 5313 nt1.12□□□□□ -2.23
VPS55P47111 MFB1YDR219C 1398 nt1.12□□□□□ -2.23
VPS55P47111 UBP16YPL072W 1500 nt1.12□□□□□ -2.23
VPS55P47111 DCP2YNL118C 2913 nt1.12□□□□□ -2.23
VPS55P47111 TVP15YDR100W 432 nt1.12□□□□□ -2.23
VPS55P47111 ARI1YGL157W 1044 nt1.12□□□□□ -2.23
VPS55P47111 YAL034C-BYAL034C-B 354 nt1.12□□□□□ -2.23
VPS55P47111 YKR075W-AYKR075W-A 270 nt1.12□□□□□ -2.23
VPS55P47111 YLR050CYLR050C 486 nt1.12□□□□□ -2.23
VPS55P47111 ECI1YLR284C 843 nt1.12□□□□□ -2.23
Retrieved 100 of 7,029 protein–RNA pairs in 24.6 ms