Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NR4A2P43354 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NR4A2P43354 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
NR4A2P43354 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NR4A2P43354 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
NR4A2P43354 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
NR4A2P43354 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
NR4A2P43354 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NR4A2P43354 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NR4A2P43354 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NR4A2P43354 AC123595.1-201ENST00000440769 1046 ntBASIC18.63■□□□□ 0.57
NR4A2P43354 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NR4A2P43354 AC012414.1-201ENST00000556676 535 ntBASIC18.63■□□□□ 0.57
NR4A2P43354 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.63■□□□□ 0.57
NR4A2P43354 AL031602.1-201ENST00000633169 911 ntBASIC18.63■□□□□ 0.57
NR4A2P43354 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.63■□□□□ 0.57
NR4A2P43354 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.63■□□□□ 0.57
NR4A2P43354 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NR4A2P43354 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
NR4A2P43354 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NR4A2P43354 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.63■□□□□ 0.57
NR4A2P43354 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.63■□□□□ 0.57
NR4A2P43354 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.63■□□□□ 0.57
NR4A2P43354 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NR4A2P43354 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NR4A2P43354 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NR4A2P43354 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NR4A2P43354 FEM1AP1-201ENST00000431297 1995 ntBASIC18.62■□□□□ 0.57
NR4A2P43354 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NR4A2P43354 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NR4A2P43354 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NR4A2P43354 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.62■□□□□ 0.57
NR4A2P43354 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NR4A2P43354 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NR4A2P43354 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
NR4A2P43354 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NR4A2P43354 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NR4A2P43354 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.62■□□□□ 0.57
NR4A2P43354 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.62■□□□□ 0.57
NR4A2P43354 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NR4A2P43354 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.62■□□□□ 0.57
NR4A2P43354 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.62■□□□□ 0.57
NR4A2P43354 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.62■□□□□ 0.57
NR4A2P43354 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.62■□□□□ 0.57
NR4A2P43354 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NR4A2P43354 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NR4A2P43354 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NR4A2P43354 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NR4A2P43354 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
NR4A2P43354 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NR4A2P43354 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.62■□□□□ 0.57
NR4A2P43354 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NR4A2P43354 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
NR4A2P43354 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NR4A2P43354 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NR4A2P43354 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NR4A2P43354 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NR4A2P43354 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NR4A2P43354 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NR4A2P43354 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NR4A2P43354 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NR4A2P43354 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NR4A2P43354 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.61■□□□□ 0.57
NR4A2P43354 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
NR4A2P43354 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
NR4A2P43354 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NR4A2P43354 KRT18P5-201ENST00000436075 1291 ntBASIC18.61■□□□□ 0.57
NR4A2P43354 AC010525.1-201ENST00000585559 441 ntBASIC18.61■□□□□ 0.57
NR4A2P43354 MIR6084-201ENST00000622012 110 ntBASIC18.61■□□□□ 0.57
NR4A2P43354 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.61■□□□□ 0.57
NR4A2P43354 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.61■□□□□ 0.57
NR4A2P43354 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NR4A2P43354 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NR4A2P43354 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NR4A2P43354 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NR4A2P43354 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.6■□□□□ 0.57
NR4A2P43354 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.6■□□□□ 0.57
NR4A2P43354 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.6■□□□□ 0.57
NR4A2P43354 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
NR4A2P43354 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NR4A2P43354 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NR4A2P43354 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NR4A2P43354 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.6■□□□□ 0.57
NR4A2P43354 DUX4L2-201ENST00000561772 1275 ntBASIC18.6■□□□□ 0.57
NR4A2P43354 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
NR4A2P43354 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.6■□□□□ 0.57
NR4A2P43354 DUX4L6-201ENST00000626483 1275 ntBASIC18.6■□□□□ 0.57
NR4A2P43354 DUX4L1-201ENST00000627662 1275 ntBASIC18.6■□□□□ 0.57
NR4A2P43354 DUX4L8-201ENST00000629013 1275 ntBASIC18.6■□□□□ 0.57
NR4A2P43354 DUX4L3-201ENST00000630187 1275 ntBASIC18.6■□□□□ 0.57
NR4A2P43354 DUX4L7-201ENST00000630678 1275 ntBASIC18.6■□□□□ 0.57
NR4A2P43354 DUX4L5-201ENST00000630834 1275 ntBASIC18.6■□□□□ 0.57
NR4A2P43354 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.6■□□□□ 0.57
NR4A2P43354 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.6■□□□□ 0.57
NR4A2P43354 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NR4A2P43354 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NR4A2P43354 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NR4A2P43354 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NR4A2P43354 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NR4A2P43354 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 184.2 ms