Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL5P42830 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CXCL5P42830 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CXCL5P42830 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CXCL5P42830 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CXCL5P42830 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CXCL5P42830 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CXCL5P42830 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CXCL5P42830 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CXCL5P42830 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CXCL5P42830 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
CXCL5P42830 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CXCL5P42830 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC13.89□□□□□ -0.19
CXCL5P42830 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CXCL5P42830 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
CXCL5P42830 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CXCL5P42830 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CXCL5P42830 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC13.89□□□□□ -0.19
CXCL5P42830 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CXCL5P42830 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CXCL5P42830 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CXCL5P42830 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC13.89□□□□□ -0.19
CXCL5P42830 SF1-220ENST00000626028 704 ntTSL 2 BASIC13.89□□□□□ -0.19
CXCL5P42830 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC13.89□□□□□ -0.19
CXCL5P42830 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CXCL5P42830 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CXCL5P42830 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC13.89□□□□□ -0.19
CXCL5P42830 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CXCL5P42830 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC13.89□□□□□ -0.19
CXCL5P42830 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
CXCL5P42830 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CXCL5P42830 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CXCL5P42830 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CXCL5P42830 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CXCL5P42830 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CXCL5P42830 AC121338.2-201ENST00000622535 1744 ntBASIC13.88□□□□□ -0.19
CXCL5P42830 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC13.88□□□□□ -0.19
CXCL5P42830 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CXCL5P42830 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC13.88□□□□□ -0.19
CXCL5P42830 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC13.88□□□□□ -0.19
CXCL5P42830 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CXCL5P42830 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CXCL5P42830 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC13.88□□□□□ -0.19
CXCL5P42830 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CXCL5P42830 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC13.88□□□□□ -0.19
CXCL5P42830 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CXCL5P42830 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CXCL5P42830 LETM1P2-201ENST00000597330 2178 ntBASIC13.88□□□□□ -0.19
CXCL5P42830 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
CXCL5P42830 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CXCL5P42830 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CXCL5P42830 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC13.87□□□□□ -0.19
CXCL5P42830 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CXCL5P42830 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CXCL5P42830 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CXCL5P42830 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC13.87□□□□□ -0.19
CXCL5P42830 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CXCL5P42830 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC13.87□□□□□ -0.19
CXCL5P42830 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CXCL5P42830 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CXCL5P42830 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC13.87□□□□□ -0.19
CXCL5P42830 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC13.87□□□□□ -0.19
CXCL5P42830 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC13.87□□□□□ -0.19
CXCL5P42830 OR2A1-AS1-204ENST00000470435 602 ntBASIC13.87□□□□□ -0.19
CXCL5P42830 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC13.87□□□□□ -0.19
CXCL5P42830 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC13.87□□□□□ -0.19
CXCL5P42830 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC13.87□□□□□ -0.19
CXCL5P42830 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC13.87□□□□□ -0.19
CXCL5P42830 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC13.87□□□□□ -0.19
CXCL5P42830 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CXCL5P42830 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CXCL5P42830 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC13.87□□□□□ -0.19
CXCL5P42830 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CXCL5P42830 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CXCL5P42830 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL5P42830 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL5P42830 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
CXCL5P42830 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CXCL5P42830 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CXCL5P42830 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL5P42830 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL5P42830 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL5P42830 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL5P42830 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CXCL5P42830 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL5P42830 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL5P42830 FXN-202ENST00000396364 980 ntTSL 5 BASIC13.86□□□□□ -0.19
CXCL5P42830 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
CXCL5P42830 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC13.86□□□□□ -0.19
CXCL5P42830 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
CXCL5P42830 PALM-207ENST00000590161 2137 ntTSL 4 BASIC13.86□□□□□ -0.19
CXCL5P42830 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC13.86□□□□□ -0.19
CXCL5P42830 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CXCL5P42830 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC13.86□□□□□ -0.19
CXCL5P42830 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL5P42830 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL5P42830 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CXCL5P42830 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC13.86□□□□□ -0.19
CXCL5P42830 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL5P42830 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms