Protein–RNA interactions for Protein: P42677

RPS27, 40S ribosomal protein S27, humanhuman

Known RBP Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27P42677 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPS27P42677 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
RPS27P42677 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPS27P42677 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RPS27P42677 FP700111.2-201ENST00000619190 1892 ntBASIC18.33■□□□□ 0.53
RPS27P42677 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPS27P42677 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
RPS27P42677 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPS27P42677 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPS27P42677 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.33■□□□□ 0.52
RPS27P42677 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPS27P42677 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPS27P42677 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RPS27P42677 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RPS27P42677 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPS27P42677 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPS27P42677 AP004607.4-201ENST00000530158 1459 ntBASIC18.33■□□□□ 0.52
RPS27P42677 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
RPS27P42677 AC007225.1-201ENST00000566331 1836 ntBASIC18.33■□□□□ 0.52
RPS27P42677 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RPS27P42677 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
RPS27P42677 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPS27P42677 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPS27P42677 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPS27P42677 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPS27P42677 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPS27P42677 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.32■□□□□ 0.52
RPS27P42677 MIR638-201ENST00000385237 100 ntBASIC18.32■□□□□ 0.52
RPS27P42677 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.32■□□□□ 0.52
RPS27P42677 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPS27P42677 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RPS27P42677 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.32■□□□□ 0.52
RPS27P42677 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPS27P42677 KRT87P-202ENST00000534226 1464 ntBASIC18.32■□□□□ 0.52
RPS27P42677 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPS27P42677 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.31■□□□□ 0.52
RPS27P42677 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RPS27P42677 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.31■□□□□ 0.52
RPS27P42677 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPS27P42677 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPS27P42677 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RPS27P42677 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.31■□□□□ 0.52
RPS27P42677 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
RPS27P42677 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.31■□□□□ 0.52
RPS27P42677 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPS27P42677 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPS27P42677 GABARAPL3-202ENST00000624044 1851 ntBASIC18.31■□□□□ 0.52
RPS27P42677 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
RPS27P42677 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RPS27P42677 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.3■□□□□ 0.52
RPS27P42677 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.3■□□□□ 0.52
RPS27P42677 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.3■□□□□ 0.52
RPS27P42677 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPS27P42677 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RPS27P42677 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RPS27P42677 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RPS27P42677 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.3■□□□□ 0.52
RPS27P42677 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPS27P42677 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
RPS27P42677 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPS27P42677 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPS27P42677 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPS27P42677 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPS27P42677 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.3■□□□□ 0.52
RPS27P42677 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPS27P42677 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RPS27P42677 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPS27P42677 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.29■□□□□ 0.52
RPS27P42677 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.29■□□□□ 0.52
RPS27P42677 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.29■□□□□ 0.52
RPS27P42677 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.29■□□□□ 0.52
RPS27P42677 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
RPS27P42677 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPS27P42677 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPS27P42677 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPS27P42677 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.29■□□□□ 0.52
RPS27P42677 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPS27P42677 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.29■□□□□ 0.52
RPS27P42677 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RPS27P42677 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPS27P42677 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RPS27P42677 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RPS27P42677 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPS27P42677 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPS27P42677 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.29■□□□□ 0.52
RPS27P42677 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
RPS27P42677 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.29■□□□□ 0.52
RPS27P42677 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RPS27P42677 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPS27P42677 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPS27P42677 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPS27P42677 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPS27P42677 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
RPS27P42677 AC112907.3-201ENST00000577781 2400 ntBASIC18.28■□□□□ 0.52
RPS27P42677 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPS27P42677 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
RPS27P42677 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPS27P42677 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.28■□□□□ 0.52
RPS27P42677 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RPS27P42677 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms