Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.53■□□□□ 0.24
ATP6V0CP27449 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
ATP6V0CP27449 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
ATP6V0CP27449 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6V0CP27449 TNXA-203ENST00000507684 2038 ntBASIC16.53■□□□□ 0.24
ATP6V0CP27449 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6V0CP27449 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC16.53■□□□□ 0.24
ATP6V0CP27449 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6V0CP27449 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.53■□□□□ 0.24
ATP6V0CP27449 TCF3P1-201ENST00000423021 1937 ntBASIC16.53■□□□□ 0.24
ATP6V0CP27449 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6V0CP27449 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
ATP6V0CP27449 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6V0CP27449 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6V0CP27449 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6V0CP27449 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC16.53■□□□□ 0.24
ATP6V0CP27449 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC16.53■□□□□ 0.24
ATP6V0CP27449 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
ATP6V0CP27449 MIR4508-201ENST00000584178 70 ntBASIC16.53■□□□□ 0.24
ATP6V0CP27449 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.53■□□□□ 0.24
ATP6V0CP27449 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATP6V0CP27449 AC133637.1-201ENST00000624115 1537 ntBASIC16.53■□□□□ 0.24
ATP6V0CP27449 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
ATP6V0CP27449 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.53■□□□□ 0.24
ATP6V0CP27449 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC16.53■□□□□ 0.24
ATP6V0CP27449 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
ATP6V0CP27449 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
ATP6V0CP27449 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP6V0CP27449 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP6V0CP27449 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ATP6V0CP27449 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP6V0CP27449 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.52■□□□□ 0.24
ATP6V0CP27449 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP6V0CP27449 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP6V0CP27449 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
ATP6V0CP27449 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP6V0CP27449 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP6V0CP27449 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.52■□□□□ 0.24
ATP6V0CP27449 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ATP6V0CP27449 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC16.52■□□□□ 0.24
ATP6V0CP27449 Z92544.1-202ENST00000571933 1220 ntBASIC16.52■□□□□ 0.24
ATP6V0CP27449 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
ATP6V0CP27449 AC087239.1-201ENST00000622671 572 ntBASIC16.52■□□□□ 0.24
ATP6V0CP27449 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP6V0CP27449 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
ATP6V0CP27449 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.52■□□□□ 0.23
ATP6V0CP27449 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
ATP6V0CP27449 AP004607.7-201ENST00000527152 1677 ntBASIC16.52■□□□□ 0.23
ATP6V0CP27449 AC004408.2-201ENST00000623613 2777 ntBASIC16.52■□□□□ 0.23
ATP6V0CP27449 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.52■□□□□ 0.23
ATP6V0CP27449 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
ATP6V0CP27449 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP6V0CP27449 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP6V0CP27449 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATP6V0CP27449 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP6V0CP27449 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATP6V0CP27449 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.51■□□□□ 0.23
ATP6V0CP27449 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP6V0CP27449 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP6V0CP27449 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP6V0CP27449 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
ATP6V0CP27449 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP6V0CP27449 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
ATP6V0CP27449 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP6V0CP27449 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP6V0CP27449 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC16.51■□□□□ 0.23
ATP6V0CP27449 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
ATP6V0CP27449 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATP6V0CP27449 GATM-206ENST00000558336 1522 ntTSL 2 BASIC16.5■□□□□ 0.23
ATP6V0CP27449 GTSE1-AS1-202ENST00000623117 1518 ntBASIC16.5■□□□□ 0.23
ATP6V0CP27449 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATP6V0CP27449 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATP6V0CP27449 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC16.5■□□□□ 0.23
ATP6V0CP27449 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.5■□□□□ 0.23
ATP6V0CP27449 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC16.5■□□□□ 0.23
ATP6V0CP27449 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATP6V0CP27449 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.5■□□□□ 0.23
ATP6V0CP27449 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.5■□□□□ 0.23
ATP6V0CP27449 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC16.5■□□□□ 0.23
ATP6V0CP27449 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATP6V0CP27449 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.5■□□□□ 0.23
ATP6V0CP27449 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ATP6V0CP27449 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATP6V0CP27449 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATP6V0CP27449 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
ATP6V0CP27449 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATP6V0CP27449 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ATP6V0CP27449 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC16.5■□□□□ 0.23
ATP6V0CP27449 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATP6V0CP27449 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
ATP6V0CP27449 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATP6V0CP27449 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.49■□□□□ 0.23
ATP6V0CP27449 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP6V0CP27449 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.49■□□□□ 0.23
ATP6V0CP27449 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
ATP6V0CP27449 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
ATP6V0CP27449 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.49■□□□□ 0.23
ATP6V0CP27449 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.49■□□□□ 0.23
ATP6V0CP27449 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP6V0CP27449 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms