Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 NIC96YFR002W 2520 nt1.39□□□□□ -2.19
CDC39P25655 NOP56YLR197W 1515 nt1.39□□□□□ -2.19
CDC39P25655 snR68snR68 136 nt1.39□□□□□ -2.19
CDC39P25655 VMA10YHR039C-A 345 nt1.39□□□□□ -2.19
CDC39P25655 YIL102CYIL102C 306 nt1.39□□□□□ -2.19
CDC39P25655 YIR023C-AYIR023C-A 324 nt1.39□□□□□ -2.19
CDC39P25655 POP8YBL018C 402 nt1.39□□□□□ -2.19
CDC39P25655 CSI1YMR025W 888 nt1.39□□□□□ -2.19
CDC39P25655 MRPL17YNL252C 846 nt1.39□□□□□ -2.19
CDC39P25655 TSR4YOL022C 1227 nt1.39□□□□□ -2.19
CDC39P25655 IAH1YOR126C 717 nt1.39□□□□□ -2.19
CDC39P25655 SEY1YOR165W 2331 nt1.38□□□□□ -2.19
CDC39P25655 VPS16YPL045W 2397 nt1.38□□□□□ -2.19
CDC39P25655 YDR320W-BYDR320W-B 138 nt1.38□□□□□ -2.19
CDC39P25655 YGR050CYGR050C 357 nt1.38□□□□□ -2.19
CDC39P25655 SPO20YMR017W 1194 nt1.38□□□□□ -2.19
CDC39P25655 MAK10YEL053C 2202 nt1.38□□□□□ -2.19
CDC39P25655 NUP192YJL039C 5052 nt1.38□□□□□ -2.19
CDC39P25655 SST2YLR452C 2097 nt1.38□□□□□ -2.19
CDC39P25655 ARK1YNL020C 1917 nt1.38□□□□□ -2.19
CDC39P25655 PFD1YJL179W 330 nt1.37□□□□□ -2.19
CDC39P25655 YMR178WYMR178W 825 nt1.37□□□□□ -2.19
CDC39P25655 RGL1YPL066W 1440 nt1.37□□□□□ -2.19
CDC39P25655 SSF1YHR066W 1362 nt1.37□□□□□ -2.19
CDC39P25655 YPD1YDL235C 504 nt1.37□□□□□ -2.19
CDC39P25655 tT(UGU)HtT(UGU)H 72 nt1.37□□□□□ -2.19
CDC39P25655 YIL046W-AYIL046W-A 165 nt1.37□□□□□ -2.19
CDC39P25655 YAL034C-BYAL034C-B 354 nt1.37□□□□□ -2.19
CDC39P25655 DYN3YMR299C 939 nt1.37□□□□□ -2.19
CDC39P25655 SLM1YIL105C 2061 nt1.37□□□□□ -2.19
CDC39P25655 URB2YJR041C 3525 nt1.37□□□□□ -2.19
CDC39P25655 GPI17YDR434W 1605 nt1.37□□□□□ -2.19
CDC39P25655 RUD3YOR216C 1455 nt1.36□□□□□ -2.19
CDC39P25655 RNH202YDR279W 1053 nt1.36□□□□□ -2.19
CDC39P25655 UPF3YGR072W 1164 nt1.36□□□□□ -2.19
CDC39P25655 CSE4YKL049C 690 nt1.36□□□□□ -2.19
CDC39P25655 HRT3YLR097C 1035 nt1.36□□□□□ -2.19
CDC39P25655 ESF2YNR054C 951 nt1.36□□□□□ -2.19
CDC39P25655 YPR074W-AYPR074W-A 171 nt1.36□□□□□ -2.19
CDC39P25655 CDC25YLR310C 4770 nt1.36□□□□□ -2.19
CDC39P25655 DSE1YER124C 1722 nt1.36□□□□□ -2.19
CDC39P25655 VPS8YAL002W 3825 nt1.36□□□□□ -2.19
CDC39P25655 PUF4YGL014W 2667 nt1.36□□□□□ -2.19
CDC39P25655 TAF2YCR042C 4224 nt1.36□□□□□ -2.19
CDC39P25655 ROY1YMR258C 1662 nt1.36□□□□□ -2.19
CDC39P25655 CCH1YGR217W 6120 nt1.36□□□□□ -2.19
CDC39P25655 CPR5YDR304C 678 nt1.36□□□□□ -2.19
CDC39P25655 FIP1YJR093C 984 nt1.36□□□□□ -2.19
CDC39P25655 HUA2YOR284W 732 nt1.36□□□□□ -2.19
CDC39P25655 GLC7YER133W 939 nt1.35□□□□□ -2.19
CDC39P25655 YIL068W-AYIL068W-A 384 nt1.35□□□□□ -2.19
CDC39P25655 YIR036W-AYIR036W-A 402 nt1.35□□□□□ -2.19
CDC39P25655 CRS5YOR031W 210 nt1.35□□□□□ -2.19
CDC39P25655 MSH6YDR097C 3729 nt1.35□□□□□ -2.19
CDC39P25655 STD1YOR047C 1335 nt1.35□□□□□ -2.19
CDC39P25655 RTT101YJL047C 2529 nt1.34□□□□□ -2.19
CDC39P25655 CDC24YAL041W 2565 nt1.34□□□□□ -2.19
CDC39P25655 VPH1YOR270C 2523 nt1.34□□□□□ -2.2
CDC39P25655 YEL1YBL060W 2064 nt1.34□□□□□ -2.2
CDC39P25655 AI3Q0060 1248 nt1.34□□□□□ -2.2
CDC39P25655 RAV2YDR202C 1056 nt1.34□□□□□ -2.2
CDC39P25655 HLR1YDR528W 1272 nt1.34□□□□□ -2.2
CDC39P25655 RAD10YML095C 633 nt1.34□□□□□ -2.2
CDC39P25655 YNL234WYNL234W 1281 nt1.34□□□□□ -2.2
CDC39P25655 YBP1YBR216C 2025 nt1.34□□□□□ -2.2
CDC39P25655 NPR1YNL183C 2373 nt1.33□□□□□ -2.2
CDC39P25655 YET2YMR040W 483 nt1.33□□□□□ -2.2
CDC39P25655 MUM2YBR057C 1101 nt1.33□□□□□ -2.2
CDC39P25655 MDM36YPR083W 1740 nt1.33□□□□□ -2.2
CDC39P25655 TTI1YKL033W 3117 nt1.33□□□□□ -2.2
CDC39P25655 MDM20YOL076W 2391 nt1.33□□□□□ -2.2
CDC39P25655 YER119C-AYER119C-A 372 nt1.33□□□□□ -2.2
CDC39P25655 UTP30YKR060W 825 nt1.33□□□□□ -2.2
CDC39P25655 ARP9YMR033W 1404 nt1.33□□□□□ -2.2
CDC39P25655 YOR146WYOR146W 306 nt1.33□□□□□ -2.2
CDC39P25655 PAC1YOR269W 1485 nt1.32□□□□□ -2.2
CDC39P25655 IRC4YDR540C 540 nt1.32□□□□□ -2.2
CDC39P25655 YFH7YFR007W 1062 nt1.32□□□□□ -2.2
CDC39P25655 OTU2YHL013C 924 nt1.32□□□□□ -2.2
CDC39P25655 RMP1YLR145W 606 nt1.32□□□□□ -2.2
CDC39P25655 YRO2YBR054W 1035 nt1.32□□□□□ -2.2
CDC39P25655 SRB4YER022W 2064 nt1.32□□□□□ -2.2
CDC39P25655 YMR181CYMR181C 465 nt1.31□□□□□ -2.2
CDC39P25655 SLM4YBR077C 489 nt1.31□□□□□ -2.2
CDC39P25655 YPR145C-AYPR145C-A 237 nt1.31□□□□□ -2.2
CDC39P25655 CDC60YPL160W 3273 nt1.31□□□□□ -2.2
CDC39P25655 POM152YMR129W 4014 nt1.31□□□□□ -2.2
CDC39P25655 TRS130YMR218C 3309 nt1.31□□□□□ -2.2
CDC39P25655 ARC18YLR370C 537 nt1.31□□□□□ -2.2
CDC39P25655 MFB1YDR219C 1398 nt1.31□□□□□ -2.2
CDC39P25655 RTG3YBL103C 1461 nt1.31□□□□□ -2.2
CDC39P25655 YIL166CYIL166C 1629 nt1.3□□□□□ -2.2
CDC39P25655 PET100YDR079W 336 nt1.3□□□□□ -2.2
CDC39P25655 YER107W-AYER107W-A 321 nt1.3□□□□□ -2.2
CDC39P25655 RPS29AYLR388W 171 nt1.3□□□□□ -2.2
CDC39P25655 YPR142CYPR142C 564 nt1.3□□□□□ -2.2
CDC39P25655 snR35snR35 204 nt1.3□□□□□ -2.2
CDC39P25655 INP51YIL002C 2841 nt1.3□□□□□ -2.2
CDC39P25655 CHS1YNL192W 3396 nt1.3□□□□□ -2.2
CDC39P25655 snR57snR57 88 nt1.3□□□□□ -2.2
Retrieved 100 of 7,029 protein–RNA pairs in 28.3 ms