Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.56■□□□□ 0.88
BCKDHBP21953 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.56■□□□□ 0.88
BCKDHBP21953 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BCKDHBP21953 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
BCKDHBP21953 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
BCKDHBP21953 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.56■□□□□ 0.88
BCKDHBP21953 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BCKDHBP21953 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
BCKDHBP21953 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.55■□□□□ 0.88
BCKDHBP21953 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
BCKDHBP21953 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BCKDHBP21953 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BCKDHBP21953 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
BCKDHBP21953 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BCKDHBP21953 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
BCKDHBP21953 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.55■□□□□ 0.88
BCKDHBP21953 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BCKDHBP21953 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.55■□□□□ 0.88
BCKDHBP21953 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BCKDHBP21953 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.55■□□□□ 0.88
BCKDHBP21953 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BCKDHBP21953 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
BCKDHBP21953 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
BCKDHBP21953 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BCKDHBP21953 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.54■□□□□ 0.88
BCKDHBP21953 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BCKDHBP21953 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.54■□□□□ 0.88
BCKDHBP21953 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BCKDHBP21953 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
BCKDHBP21953 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BCKDHBP21953 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
BCKDHBP21953 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.54■□□□□ 0.88
BCKDHBP21953 AC233702.5-201ENST00000584107 538 ntBASIC20.54■□□□□ 0.88
BCKDHBP21953 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
BCKDHBP21953 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BCKDHBP21953 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
BCKDHBP21953 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
BCKDHBP21953 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BCKDHBP21953 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BCKDHBP21953 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BCKDHBP21953 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BCKDHBP21953 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.53■□□□□ 0.88
BCKDHBP21953 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BCKDHBP21953 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BCKDHBP21953 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
BCKDHBP21953 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BCKDHBP21953 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
BCKDHBP21953 AC012618.2-201ENST00000428058 849 ntBASIC20.53■□□□□ 0.88
BCKDHBP21953 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.53■□□□□ 0.88
BCKDHBP21953 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.53■□□□□ 0.88
BCKDHBP21953 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
BCKDHBP21953 BX088651.1-201ENST00000540551 451 ntBASIC20.53■□□□□ 0.88
BCKDHBP21953 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.53■□□□□ 0.88
BCKDHBP21953 MTDHP1-201ENST00000605323 784 ntBASIC20.53■□□□□ 0.88
BCKDHBP21953 LINC01023-201ENST00000606054 436 ntBASIC20.53■□□□□ 0.88
BCKDHBP21953 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
BCKDHBP21953 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
BCKDHBP21953 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BCKDHBP21953 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BCKDHBP21953 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BCKDHBP21953 FAM99A-202ENST00000538190 1989 ntBASIC20.53■□□□□ 0.88
BCKDHBP21953 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BCKDHBP21953 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BCKDHBP21953 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.53■□□□□ 0.88
BCKDHBP21953 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
BCKDHBP21953 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.53■□□□□ 0.88
BCKDHBP21953 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
BCKDHBP21953 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.52■□□□□ 0.88
BCKDHBP21953 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
BCKDHBP21953 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
BCKDHBP21953 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BCKDHBP21953 RPS2P55-201ENST00000397318 883 ntBASIC20.52■□□□□ 0.88
BCKDHBP21953 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.52■□□□□ 0.88
BCKDHBP21953 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
BCKDHBP21953 AC107956.1-201ENST00000494359 873 ntBASIC20.52■□□□□ 0.88
BCKDHBP21953 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
BCKDHBP21953 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.52■□□□□ 0.88
BCKDHBP21953 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
BCKDHBP21953 C2orf69P4-201ENST00000565394 541 ntBASIC20.52■□□□□ 0.88
BCKDHBP21953 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.52■□□□□ 0.88
BCKDHBP21953 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.52■□□□□ 0.88
BCKDHBP21953 AL023875.1-201ENST00000640777 796 ntBASIC20.52■□□□□ 0.88
BCKDHBP21953 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
BCKDHBP21953 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.52■□□□□ 0.87
BCKDHBP21953 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.87
BCKDHBP21953 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.52■□□□□ 0.87
BCKDHBP21953 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.52■□□□□ 0.87
BCKDHBP21953 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BCKDHBP21953 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
BCKDHBP21953 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
BCKDHBP21953 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
BCKDHBP21953 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
BCKDHBP21953 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BCKDHBP21953 KRT18P21-201ENST00000515767 1272 ntBASIC20.51■□□□□ 0.87
BCKDHBP21953 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
BCKDHBP21953 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.51■□□□□ 0.87
BCKDHBP21953 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.51■□□□□ 0.87
BCKDHBP21953 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
BCKDHBP21953 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
BCKDHBP21953 AC124016.1-201ENST00000609552 612 ntBASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms