Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
MRPL3P09001 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
MRPL3P09001 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MRPL3P09001 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.52■□□□□ 0.56
MRPL3P09001 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.52■□□□□ 0.56
MRPL3P09001 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
MRPL3P09001 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
MRPL3P09001 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MRPL3P09001 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
MRPL3P09001 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
MRPL3P09001 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
MRPL3P09001 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.52■□□□□ 0.56
MRPL3P09001 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MRPL3P09001 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MRPL3P09001 AC008764.7-201ENST00000593779 1081 ntBASIC18.52■□□□□ 0.56
MRPL3P09001 AC105233.4-201ENST00000642045 216 ntBASIC18.52■□□□□ 0.56
MRPL3P09001 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.52■□□□□ 0.56
MRPL3P09001 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.52■□□□□ 0.55
MRPL3P09001 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
MRPL3P09001 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
MRPL3P09001 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
MRPL3P09001 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MRPL3P09001 AC112907.3-201ENST00000577781 2400 ntBASIC18.51■□□□□ 0.55
MRPL3P09001 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.51■□□□□ 0.55
MRPL3P09001 AC020907.5-201ENST00000624372 1936 ntBASIC18.51■□□□□ 0.55
MRPL3P09001 AC005224.4-201ENST00000583262 1652 ntBASIC18.51■□□□□ 0.55
MRPL3P09001 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MRPL3P09001 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.51■□□□□ 0.55
MRPL3P09001 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MRPL3P09001 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.51■□□□□ 0.55
MRPL3P09001 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MRPL3P09001 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
MRPL3P09001 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MRPL3P09001 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.51■□□□□ 0.55
MRPL3P09001 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
MRPL3P09001 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
MRPL3P09001 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
MRPL3P09001 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
MRPL3P09001 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
MRPL3P09001 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MRPL3P09001 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.5■□□□□ 0.55
MRPL3P09001 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
MRPL3P09001 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.5■□□□□ 0.55
MRPL3P09001 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MRPL3P09001 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.5■□□□□ 0.55
MRPL3P09001 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.5■□□□□ 0.55
MRPL3P09001 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.5■□□□□ 0.55
MRPL3P09001 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
MRPL3P09001 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
MRPL3P09001 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
MRPL3P09001 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
MRPL3P09001 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
MRPL3P09001 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
MRPL3P09001 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
MRPL3P09001 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.5■□□□□ 0.55
MRPL3P09001 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
MRPL3P09001 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
MRPL3P09001 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
MRPL3P09001 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
MRPL3P09001 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
MRPL3P09001 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.49■□□□□ 0.55
MRPL3P09001 TSPY26P-201ENST00000476365 1326 ntBASIC18.49■□□□□ 0.55
MRPL3P09001 AC135279.3-201ENST00000610945 1311 ntBASIC18.49■□□□□ 0.55
MRPL3P09001 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.49■□□□□ 0.55
MRPL3P09001 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.49■□□□□ 0.55
MRPL3P09001 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MRPL3P09001 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MRPL3P09001 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
MRPL3P09001 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
MRPL3P09001 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.49■□□□□ 0.55
MRPL3P09001 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
MRPL3P09001 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.49■□□□□ 0.55
MRPL3P09001 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MRPL3P09001 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.49■□□□□ 0.55
MRPL3P09001 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.49■□□□□ 0.55
MRPL3P09001 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.49■□□□□ 0.55
MRPL3P09001 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MRPL3P09001 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.49■□□□□ 0.55
MRPL3P09001 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MRPL3P09001 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
MRPL3P09001 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MRPL3P09001 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
MRPL3P09001 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MRPL3P09001 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
MRPL3P09001 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MRPL3P09001 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
MRPL3P09001 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MRPL3P09001 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MRPL3P09001 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
MRPL3P09001 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
MRPL3P09001 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MRPL3P09001 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MRPL3P09001 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MRPL3P09001 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MRPL3P09001 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
MRPL3P09001 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
MRPL3P09001 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MRPL3P09001 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MRPL3P09001 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
MRPL3P09001 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms