Protein–RNA interactions for Protein: P04553

PRM1, Sperm protamine P1, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRM1P04553 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC5.07□□□□□ -1.6
PRM1P04553 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PRM1P04553 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC5.07□□□□□ -1.6
PRM1P04553 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC5.07□□□□□ -1.6
PRM1P04553 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PRM1P04553 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PRM1P04553 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC5.06□□□□□ -1.6
PRM1P04553 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC5.06□□□□□ -1.6
PRM1P04553 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PRM1P04553 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
PRM1P04553 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
PRM1P04553 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PRM1P04553 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC5.06□□□□□ -1.6
PRM1P04553 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC5.06□□□□□ -1.6
PRM1P04553 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PRM1P04553 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC5.06□□□□□ -1.6
PRM1P04553 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC5.06□□□□□ -1.6
PRM1P04553 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC5.06□□□□□ -1.6
PRM1P04553 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
PRM1P04553 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
PRM1P04553 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PRM1P04553 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC5.06□□□□□ -1.6
PRM1P04553 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC5.06□□□□□ -1.6
PRM1P04553 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
PRM1P04553 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC5.06□□□□□ -1.6
PRM1P04553 AC112907.3-201ENST00000577781 2400 ntBASIC5.06□□□□□ -1.6
PRM1P04553 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PRM1P04553 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
PRM1P04553 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PRM1P04553 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC5.06□□□□□ -1.6
PRM1P04553 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PRM1P04553 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC5.06□□□□□ -1.6
PRM1P04553 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
PRM1P04553 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PRM1P04553 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PRM1P04553 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
PRM1P04553 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
PRM1P04553 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
PRM1P04553 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC5.05□□□□□ -1.6
PRM1P04553 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
PRM1P04553 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC5.05□□□□□ -1.6
PRM1P04553 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PRM1P04553 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PRM1P04553 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC5.05□□□□□ -1.6
PRM1P04553 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PRM1P04553 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PRM1P04553 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PRM1P04553 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PRM1P04553 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PRM1P04553 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
PRM1P04553 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
PRM1P04553 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC5.05□□□□□ -1.6
PRM1P04553 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC5.05□□□□□ -1.6
PRM1P04553 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
PRM1P04553 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
PRM1P04553 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PRM1P04553 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PRM1P04553 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC5.05□□□□□ -1.6
PRM1P04553 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms