Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.54■□□□□ 0.56
HLA-DPB1P04440 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.54■□□□□ 0.56
HLA-DPB1P04440 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DPB1P04440 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.54■□□□□ 0.56
HLA-DPB1P04440 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DPB1P04440 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DPB1P04440 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
HLA-DPB1P04440 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DPB1P04440 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.54■□□□□ 0.56
HLA-DPB1P04440 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DPB1P04440 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
HLA-DPB1P04440 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DPB1P04440 RASA4CP-201ENST00000424092 1398 ntBASIC18.54■□□□□ 0.56
HLA-DPB1P04440 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
HLA-DPB1P04440 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DPB1P04440 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DPB1P04440 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HLA-DPB1P04440 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DPB1P04440 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DPB1P04440 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DPB1P04440 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DPB1P04440 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.53■□□□□ 0.56
HLA-DPB1P04440 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.53■□□□□ 0.56
HLA-DPB1P04440 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DPB1P04440 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DPB1P04440 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DPB1P04440 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DPB1P04440 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DPB1P04440 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.53■□□□□ 0.56
HLA-DPB1P04440 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
HLA-DPB1P04440 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.53■□□□□ 0.56
HLA-DPB1P04440 AC091305.1-201ENST00000479476 895 ntBASIC18.53■□□□□ 0.56
HLA-DPB1P04440 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
HLA-DPB1P04440 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DPB1P04440 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DPB1P04440 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DPB1P04440 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
HLA-DPB1P04440 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.53■□□□□ 0.56
HLA-DPB1P04440 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.53■□□□□ 0.56
HLA-DPB1P04440 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DPB1P04440 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
HLA-DPB1P04440 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
HLA-DPB1P04440 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
HLA-DPB1P04440 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
HLA-DPB1P04440 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
HLA-DPB1P04440 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HLA-DPB1P04440 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
HLA-DPB1P04440 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HLA-DPB1P04440 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HLA-DPB1P04440 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.52■□□□□ 0.56
HLA-DPB1P04440 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
HLA-DPB1P04440 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.52■□□□□ 0.56
HLA-DPB1P04440 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
HLA-DPB1P04440 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.52■□□□□ 0.55
HLA-DPB1P04440 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HLA-DPB1P04440 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HLA-DPB1P04440 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HLA-DPB1P04440 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HLA-DPB1P04440 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HLA-DPB1P04440 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HLA-DPB1P04440 TSPY26P-201ENST00000476365 1326 ntBASIC18.51■□□□□ 0.55
HLA-DPB1P04440 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.51■□□□□ 0.55
HLA-DPB1P04440 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
HLA-DPB1P04440 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.51■□□□□ 0.55
HLA-DPB1P04440 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DPB1P04440 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.51■□□□□ 0.55
HLA-DPB1P04440 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DPB1P04440 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DPB1P04440 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.51■□□□□ 0.55
HLA-DPB1P04440 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
HLA-DPB1P04440 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DPB1P04440 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DPB1P04440 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DPB1P04440 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DPB1P04440 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.51■□□□□ 0.55
HLA-DPB1P04440 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DPB1P04440 AC027702.1-201ENST00000563810 1770 ntBASIC18.5■□□□□ 0.55
HLA-DPB1P04440 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
HLA-DPB1P04440 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DPB1P04440 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.5■□□□□ 0.55
HLA-DPB1P04440 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DPB1P04440 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DPB1P04440 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DPB1P04440 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DPB1P04440 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DPB1P04440 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
HLA-DPB1P04440 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.5■□□□□ 0.55
HLA-DPB1P04440 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.5■□□□□ 0.55
HLA-DPB1P04440 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DPB1P04440 IGHV3-19-201ENST00000521488 291 ntBASIC18.5■□□□□ 0.55
HLA-DPB1P04440 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DPB1P04440 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DPB1P04440 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.5■□□□□ 0.55
HLA-DPB1P04440 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.5■□□□□ 0.55
HLA-DPB1P04440 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DPB1P04440 AC020907.5-201ENST00000624372 1936 ntBASIC18.5■□□□□ 0.55
HLA-DPB1P04440 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
HLA-DPB1P04440 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DPB1P04440 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
HLA-DPB1P04440 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms