Protein–RNA interactions for Protein: P04259

KRT6B, Keratin, type II cytoskeletal 6B, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6BP04259 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.99■□□□□ 0.79
KRT6BP04259 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT6BP04259 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT6BP04259 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KRT6BP04259 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.99■□□□□ 0.79
KRT6BP04259 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
KRT6BP04259 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
KRT6BP04259 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT6BP04259 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.99■□□□□ 0.79
KRT6BP04259 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KRT6BP04259 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
KRT6BP04259 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT6BP04259 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
KRT6BP04259 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.98■□□□□ 0.79
KRT6BP04259 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT6BP04259 AC011484.1-201ENST00000377652 1995 ntBASIC19.98■□□□□ 0.79
KRT6BP04259 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
KRT6BP04259 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.98■□□□□ 0.79
KRT6BP04259 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.98■□□□□ 0.79
KRT6BP04259 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
KRT6BP04259 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT6BP04259 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT6BP04259 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT6BP04259 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
KRT6BP04259 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT6BP04259 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT6BP04259 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT6BP04259 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
KRT6BP04259 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.97■□□□□ 0.79
KRT6BP04259 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
KRT6BP04259 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.97■□□□□ 0.79
KRT6BP04259 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT6BP04259 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT6BP04259 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT6BP04259 KRT16P2-201ENST00000414673 1423 ntBASIC19.97■□□□□ 0.79
KRT6BP04259 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.97■□□□□ 0.79
KRT6BP04259 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
KRT6BP04259 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
KRT6BP04259 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT6BP04259 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
KRT6BP04259 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT6BP04259 AC007225.1-201ENST00000566331 1836 ntBASIC19.97■□□□□ 0.79
KRT6BP04259 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT6BP04259 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.97■□□□□ 0.79
KRT6BP04259 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT6BP04259 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT6BP04259 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
KRT6BP04259 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.96■□□□□ 0.79
KRT6BP04259 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.96■□□□□ 0.79
KRT6BP04259 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
KRT6BP04259 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
KRT6BP04259 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
KRT6BP04259 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT6BP04259 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT6BP04259 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.96■□□□□ 0.79
KRT6BP04259 AC123595.1-201ENST00000440769 1046 ntBASIC19.96■□□□□ 0.79
KRT6BP04259 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.96■□□□□ 0.79
KRT6BP04259 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.96■□□□□ 0.79
KRT6BP04259 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT6BP04259 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.96■□□□□ 0.79
KRT6BP04259 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT6BP04259 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.96■□□□□ 0.79
KRT6BP04259 GABARAPL3-202ENST00000624044 1851 ntBASIC19.96■□□□□ 0.79
KRT6BP04259 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT6BP04259 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.96■□□□□ 0.79
KRT6BP04259 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT6BP04259 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
KRT6BP04259 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT6BP04259 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.96■□□□□ 0.79
KRT6BP04259 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
KRT6BP04259 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.95■□□□□ 0.78
KRT6BP04259 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
KRT6BP04259 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT6BP04259 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT6BP04259 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT6BP04259 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT6BP04259 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT6BP04259 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT6BP04259 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT6BP04259 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT6BP04259 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.95■□□□□ 0.78
KRT6BP04259 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT6BP04259 AC010141.2-201ENST00000452426 721 ntBASIC19.95■□□□□ 0.78
KRT6BP04259 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.95■□□□□ 0.78
KRT6BP04259 AP005212.1-201ENST00000581547 1997 ntBASIC19.95■□□□□ 0.78
KRT6BP04259 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT6BP04259 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT6BP04259 AC073130.3-201ENST00000624389 2278 ntBASIC19.95■□□□□ 0.78
KRT6BP04259 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KRT6BP04259 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT6BP04259 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KRT6BP04259 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
KRT6BP04259 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.94■□□□□ 0.78
KRT6BP04259 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
KRT6BP04259 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT6BP04259 AC245052.3-201ENST00000450182 901 ntBASIC19.94■□□□□ 0.78
KRT6BP04259 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.94■□□□□ 0.78
KRT6BP04259 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.94■□□□□ 0.78
KRT6BP04259 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT6BP04259 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms